Gene : Medtr4g083610 M. truncatula Mt4.0v1
Defline:  (1 of 4) PTHR22891:SF4 - PROTEIN ARGONAUTE 2-RELATED Description:  eukaryotic translation initiation factor 2c, putative
Genomic Order:  4093 Name:  ? Medtr4g083610
Secondary Identifier:  ? PAC:31115393
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g083610 0.5kb upstream 0.5kb upstream 5615 true chr4: 32548352-32553966 Medicago truncatula
Medtr4g083610 0.5kb upstream 0.5kb upstream 500 false chr4: 32548352-32548851 Medicago truncatula
Medtr4g083610 0.5kb downstream 0.5kb downstream 5615 true chr4: 32548852-32554466 Medicago truncatula
Medtr4g083610 0.5kb downstream 0.5kb downstream 500 false chr4: 32553967-32554466 Medicago truncatula
Medtr4g083610 1.0kb upstream 1.0kb upstream 6115 true chr4: 32547852-32553966 Medicago truncatula
Medtr4g083610 1.0kb upstream 1.0kb upstream 1000 false chr4: 32547852-32548851 Medicago truncatula
Medtr4g083610 1.0kb downstream 1.0kb downstream 6115 true chr4: 32548852-32554966 Medicago truncatula
Medtr4g083610 1.0kb downstream 1.0kb downstream 1000 false chr4: 32553967-32554966 Medicago truncatula
Medtr4g083610 2.0kb upstream 2.0kb upstream 7115 true chr4: 32546852-32553966 Medicago truncatula
Medtr4g083610 2.0kb upstream 2.0kb upstream 2000 false chr4: 32546852-32548851 Medicago truncatula
Medtr4g083610 2.0kb downstream 2.0kb downstream 7115 true chr4: 32548852-32555966 Medicago truncatula
Medtr4g083610 2.0kb downstream 2.0kb downstream 2000 false chr4: 32553967-32555966 Medicago truncatula
Medtr4g083610 5.0kb upstream 5.0kb upstream 10115 true chr4: 32543852-32553966 Medicago truncatula
Medtr4g083610 5.0kb upstream 5.0kb upstream 5000 false chr4: 32543852-32548851 Medicago truncatula
Medtr4g083610 5.0kb downstream 5.0kb downstream 10115 true chr4: 32548852-32558966 Medicago truncatula
Medtr4g083610 5.0kb downstream 5.0kb downstream 5000 false chr4: 32553967-32558966 Medicago truncatula
Medtr4g083610 10.0kb upstream 10.0kb upstream 15115 true chr4: 32538852-32553966 Medicago truncatula
Medtr4g083610 10.0kb upstream 10.0kb upstream 10000 false chr4: 32538852-32548851 Medicago truncatula
Medtr4g083610 10.0kb downstream 10.0kb downstream 15115 true chr4: 32548852-32563966 Medicago truncatula
Medtr4g083610 10.0kb downstream 10.0kb downstream 10000 false chr4: 32553967-32563966 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312595 5265 Fabidae View MSA
124060672 5270 Rosid View MSA
123745241 5271 Pentapetalae View MSA
122793461 5272 Eudicot View MSA
122049484 5273 Angiosperm View MSA
121311429 5274 Embryophyte View MSA
123428465 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.058     High High
cufflinks 2.413        
cufflinks 2.995        
cufflinks 2.724        
cufflinks 4.438        
cufflinks 4.715        
cufflinks 11.622     High High
cufflinks 2.483        
cufflinks 16.573     High High

0 Strain