Gene : Medtr4g084130 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR11353:SF99 - CHAPERONIN 60 SUBUNIT ALPHA 2, CHLOROPLASTIC Description:  TCP-1/cpn60 chaperonin family protein
Genomic Order:  4125 Name:  ? Medtr4g084130
Secondary Identifier:  ? PAC:31108085
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g084130 0.5kb upstream 0.5kb upstream 7403 true chr4: 32768336-32775738 Medicago truncatula
Medtr4g084130 0.5kb upstream 0.5kb upstream 500 false chr4: 32768336-32768835 Medicago truncatula
Medtr4g084130 0.5kb downstream 0.5kb downstream 7403 true chr4: 32768836-32776238 Medicago truncatula
Medtr4g084130 0.5kb downstream 0.5kb downstream 500 false chr4: 32775739-32776238 Medicago truncatula
Medtr4g084130 1.0kb upstream 1.0kb upstream 7903 true chr4: 32767836-32775738 Medicago truncatula
Medtr4g084130 1.0kb upstream 1.0kb upstream 1000 false chr4: 32767836-32768835 Medicago truncatula
Medtr4g084130 1.0kb downstream 1.0kb downstream 7903 true chr4: 32768836-32776738 Medicago truncatula
Medtr4g084130 1.0kb downstream 1.0kb downstream 1000 false chr4: 32775739-32776738 Medicago truncatula
Medtr4g084130 2.0kb upstream 2.0kb upstream 8903 true chr4: 32766836-32775738 Medicago truncatula
Medtr4g084130 2.0kb upstream 2.0kb upstream 2000 false chr4: 32766836-32768835 Medicago truncatula
Medtr4g084130 2.0kb downstream 2.0kb downstream 8903 true chr4: 32768836-32777738 Medicago truncatula
Medtr4g084130 2.0kb downstream 2.0kb downstream 2000 false chr4: 32775739-32777738 Medicago truncatula
Medtr4g084130 5.0kb upstream 5.0kb upstream 11903 true chr4: 32763836-32775738 Medicago truncatula
Medtr4g084130 5.0kb upstream 5.0kb upstream 5000 false chr4: 32763836-32768835 Medicago truncatula
Medtr4g084130 5.0kb downstream 5.0kb downstream 11903 true chr4: 32768836-32780738 Medicago truncatula
Medtr4g084130 5.0kb downstream 5.0kb downstream 5000 false chr4: 32775739-32780738 Medicago truncatula
Medtr4g084130 10.0kb upstream 10.0kb upstream 16903 true chr4: 32758836-32775738 Medicago truncatula
Medtr4g084130 10.0kb upstream 10.0kb upstream 10000 false chr4: 32758836-32768835 Medicago truncatula
Medtr4g084130 10.0kb downstream 10.0kb downstream 16903 true chr4: 32768836-32785738 Medicago truncatula
Medtr4g084130 10.0kb downstream 10.0kb downstream 10000 false chr4: 32775739-32785738 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302563 5265 Fabidae View MSA
124066772 5270 Rosid View MSA
123747305 5271 Pentapetalae View MSA
122795365 5272 Eudicot View MSA
122048196 5273 Angiosperm View MSA
121346372 5274 Embryophyte View MSA
123427883 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.28        
cufflinks 0.988        
cufflinks 1.035       High
cufflinks 0.061     Low Low
cufflinks 1.075       High
cufflinks 0.165        
cufflinks 0.268        
cufflinks 0.664        
cufflinks 0.316        

0 Strain