Gene : Medtr4g084150 M. truncatula Mt4.0v1
Defline:  (1 of 1) KOG1522 - RNA polymerase II, subunit POLR2C/RPB3 Description:  RPB3 DNA-directed RNA polymerase II subunit 3
Genomic Order:  4127 Name:  ? Medtr4g084150
Secondary Identifier:  ? PAC:31111954
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g084150 0.5kb upstream 0.5kb upstream 3764 true chr4: 32797325-32801088 Medicago truncatula
Medtr4g084150 0.5kb upstream 0.5kb upstream 500 false chr4: 32800589-32801088 Medicago truncatula
Medtr4g084150 0.5kb downstream 0.5kb downstream 3764 true chr4: 32796825-32800588 Medicago truncatula
Medtr4g084150 0.5kb downstream 0.5kb downstream 500 false chr4: 32796825-32797324 Medicago truncatula
Medtr4g084150 1.0kb upstream 1.0kb upstream 4264 true chr4: 32797325-32801588 Medicago truncatula
Medtr4g084150 1.0kb upstream 1.0kb upstream 1000 false chr4: 32800589-32801588 Medicago truncatula
Medtr4g084150 1.0kb downstream 1.0kb downstream 4264 true chr4: 32796325-32800588 Medicago truncatula
Medtr4g084150 1.0kb downstream 1.0kb downstream 1000 false chr4: 32796325-32797324 Medicago truncatula
Medtr4g084150 2.0kb upstream 2.0kb upstream 5264 true chr4: 32797325-32802588 Medicago truncatula
Medtr4g084150 2.0kb upstream 2.0kb upstream 2000 false chr4: 32800589-32802588 Medicago truncatula
Medtr4g084150 2.0kb downstream 2.0kb downstream 5264 true chr4: 32795325-32800588 Medicago truncatula
Medtr4g084150 2.0kb downstream 2.0kb downstream 2000 false chr4: 32795325-32797324 Medicago truncatula
Medtr4g084150 5.0kb upstream 5.0kb upstream 8264 true chr4: 32797325-32805588 Medicago truncatula
Medtr4g084150 5.0kb upstream 5.0kb upstream 5000 false chr4: 32800589-32805588 Medicago truncatula
Medtr4g084150 5.0kb downstream 5.0kb downstream 8264 true chr4: 32792325-32800588 Medicago truncatula
Medtr4g084150 5.0kb downstream 5.0kb downstream 5000 false chr4: 32792325-32797324 Medicago truncatula
Medtr4g084150 10.0kb upstream 10.0kb upstream 13264 true chr4: 32797325-32810588 Medicago truncatula
Medtr4g084150 10.0kb upstream 10.0kb upstream 10000 false chr4: 32800589-32810588 Medicago truncatula
Medtr4g084150 10.0kb downstream 10.0kb downstream 13264 true chr4: 32787325-32800588 Medicago truncatula
Medtr4g084150 10.0kb downstream 10.0kb downstream 10000 false chr4: 32787325-32797324 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301418 5265 Fabidae View MSA
124066500 5270 Rosid View MSA
123743057 5271 Pentapetalae View MSA
122793148 5272 Eudicot View MSA
122045385 5273 Angiosperm View MSA
121347038 5274 Embryophyte View MSA
123424070 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.387     High  
cufflinks 10.534     High  
cufflinks 13.421     High  
cufflinks 11.616     High  
cufflinks 14.548     High  
cufflinks 5.639       Low
cufflinks 8.324        
cufflinks 11.352     High  
cufflinks 16.235     High High

0 Strain