Gene : Medtr4g084910 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR15588:SF9 - U6 SNRNA-ASSOCIATED SM-LIKE PROTEIN LSM8 Description:  u6 snRNA-associated-like-Smprotein
Genomic Order:  4167 Name:  ? Medtr4g084910
Secondary Identifier:  ? PAC:31110096
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g084910 0.5kb upstream 0.5kb upstream 3958 true chr4: 33145186-33149143 Medicago truncatula
Medtr4g084910 0.5kb upstream 0.5kb upstream 500 false chr4: 33145186-33145685 Medicago truncatula
Medtr4g084910 0.5kb downstream 0.5kb downstream 3958 true chr4: 33145686-33149643 Medicago truncatula
Medtr4g084910 0.5kb downstream 0.5kb downstream 500 false chr4: 33149144-33149643 Medicago truncatula
Medtr4g084910 1.0kb upstream 1.0kb upstream 4458 true chr4: 33144686-33149143 Medicago truncatula
Medtr4g084910 1.0kb upstream 1.0kb upstream 1000 false chr4: 33144686-33145685 Medicago truncatula
Medtr4g084910 1.0kb downstream 1.0kb downstream 4458 true chr4: 33145686-33150143 Medicago truncatula
Medtr4g084910 1.0kb downstream 1.0kb downstream 1000 false chr4: 33149144-33150143 Medicago truncatula
Medtr4g084910 2.0kb upstream 2.0kb upstream 5458 true chr4: 33143686-33149143 Medicago truncatula
Medtr4g084910 2.0kb upstream 2.0kb upstream 2000 false chr4: 33143686-33145685 Medicago truncatula
Medtr4g084910 2.0kb downstream 2.0kb downstream 5458 true chr4: 33145686-33151143 Medicago truncatula
Medtr4g084910 2.0kb downstream 2.0kb downstream 2000 false chr4: 33149144-33151143 Medicago truncatula
Medtr4g084910 5.0kb upstream 5.0kb upstream 8458 true chr4: 33140686-33149143 Medicago truncatula
Medtr4g084910 5.0kb upstream 5.0kb upstream 5000 false chr4: 33140686-33145685 Medicago truncatula
Medtr4g084910 5.0kb downstream 5.0kb downstream 8458 true chr4: 33145686-33154143 Medicago truncatula
Medtr4g084910 5.0kb downstream 5.0kb downstream 5000 false chr4: 33149144-33154143 Medicago truncatula
Medtr4g084910 10.0kb upstream 10.0kb upstream 13458 true chr4: 33135686-33149143 Medicago truncatula
Medtr4g084910 10.0kb upstream 10.0kb upstream 10000 false chr4: 33135686-33145685 Medicago truncatula
Medtr4g084910 10.0kb downstream 10.0kb downstream 13458 true chr4: 33145686-33159143 Medicago truncatula
Medtr4g084910 10.0kb downstream 10.0kb downstream 10000 false chr4: 33149144-33159143 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309330 5265 Fabidae View MSA
124065490 5270 Rosid View MSA
123746583 5271 Pentapetalae View MSA
122790911 5272 Eudicot View MSA
122047376 5273 Angiosperm View MSA
121345088 5274 Embryophyte View MSA
123423767 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.374        
cufflinks 1.745        
cufflinks 2.215        
cufflinks 1.76        
cufflinks 2.624        
cufflinks 1.46       Low
cufflinks 1.951        
cufflinks 1.766        
cufflinks 3.741       High

0 Strain