Gene : Medtr4g084660 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR10285:SF53 - URIDINE KINASE Description:  P-loop nucleoside triphosphate hydrolase superfamily protein
Genomic Order:  4151 Name:  ? Medtr4g084660
Secondary Identifier:  ? PAC:31115188
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2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-7193 Medicago truncatula pathologic  
Mtruncatula PWY-7196 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g084660 0.5kb upstream 0.5kb upstream 17420 true chr4: 32980105-32997524 Medicago truncatula
Medtr4g084660 0.5kb upstream 0.5kb upstream 500 false chr4: 32997025-32997524 Medicago truncatula
Medtr4g084660 0.5kb downstream 0.5kb downstream 17420 true chr4: 32979605-32997024 Medicago truncatula
Medtr4g084660 0.5kb downstream 0.5kb downstream 500 false chr4: 32979605-32980104 Medicago truncatula
Medtr4g084660 1.0kb upstream 1.0kb upstream 17920 true chr4: 32980105-32998024 Medicago truncatula
Medtr4g084660 1.0kb upstream 1.0kb upstream 1000 false chr4: 32997025-32998024 Medicago truncatula
Medtr4g084660 1.0kb downstream 1.0kb downstream 17920 true chr4: 32979105-32997024 Medicago truncatula
Medtr4g084660 1.0kb downstream 1.0kb downstream 1000 false chr4: 32979105-32980104 Medicago truncatula
Medtr4g084660 2.0kb upstream 2.0kb upstream 18920 true chr4: 32980105-32999024 Medicago truncatula
Medtr4g084660 2.0kb upstream 2.0kb upstream 2000 false chr4: 32997025-32999024 Medicago truncatula
Medtr4g084660 2.0kb downstream 2.0kb downstream 18920 true chr4: 32978105-32997024 Medicago truncatula
Medtr4g084660 2.0kb downstream 2.0kb downstream 2000 false chr4: 32978105-32980104 Medicago truncatula
Medtr4g084660 5.0kb upstream 5.0kb upstream 21920 true chr4: 32980105-33002024 Medicago truncatula
Medtr4g084660 5.0kb upstream 5.0kb upstream 5000 false chr4: 32997025-33002024 Medicago truncatula
Medtr4g084660 5.0kb downstream 5.0kb downstream 21920 true chr4: 32975105-32997024 Medicago truncatula
Medtr4g084660 5.0kb downstream 5.0kb downstream 5000 false chr4: 32975105-32980104 Medicago truncatula
Medtr4g084660 10.0kb upstream 10.0kb upstream 26920 true chr4: 32980105-33007024 Medicago truncatula
Medtr4g084660 10.0kb upstream 10.0kb upstream 10000 false chr4: 32997025-33007024 Medicago truncatula
Medtr4g084660 10.0kb downstream 10.0kb downstream 26920 true chr4: 32970105-32997024 Medicago truncatula
Medtr4g084660 10.0kb downstream 10.0kb downstream 10000 false chr4: 32970105-32980104 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305996 5265 Fabidae View MSA
124067943 5270 Rosid View MSA
123741616 5271 Pentapetalae View MSA
122787243 5272 Eudicot View MSA
122044880 5273 Angiosperm View MSA
121351427 5274 Embryophyte View MSA
123427517 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.674        
cufflinks 0.619        
cufflinks 0.589        
cufflinks 0.13       Low
cufflinks 0.434        
cufflinks 0.086     Low Low
cufflinks 0.314        
cufflinks 0.552        
cufflinks 0.214        

0 Strain