Gene : Medtr4g089100 M. truncatula Mt4.0v1
Defline:  (1 of 19) PF06749 - Protein of unknown function (DUF1218) (DUF1218) Description:  fiber protein Fb34
Genomic Order:  4508 Name:  ? Medtr4g089100
Secondary Identifier:  ? PAC:31112478
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g089100 0.5kb upstream 0.5kb upstream 5583 true chr4: 35725261-35730843 Medicago truncatula
Medtr4g089100 0.5kb upstream 0.5kb upstream 500 false chr4: 35730344-35730843 Medicago truncatula
Medtr4g089100 0.5kb downstream 0.5kb downstream 5583 true chr4: 35724761-35730343 Medicago truncatula
Medtr4g089100 0.5kb downstream 0.5kb downstream 500 false chr4: 35724761-35725260 Medicago truncatula
Medtr4g089100 1.0kb upstream 1.0kb upstream 6083 true chr4: 35725261-35731343 Medicago truncatula
Medtr4g089100 1.0kb upstream 1.0kb upstream 1000 false chr4: 35730344-35731343 Medicago truncatula
Medtr4g089100 1.0kb downstream 1.0kb downstream 6083 true chr4: 35724261-35730343 Medicago truncatula
Medtr4g089100 1.0kb downstream 1.0kb downstream 1000 false chr4: 35724261-35725260 Medicago truncatula
Medtr4g089100 2.0kb upstream 2.0kb upstream 7083 true chr4: 35725261-35732343 Medicago truncatula
Medtr4g089100 2.0kb upstream 2.0kb upstream 2000 false chr4: 35730344-35732343 Medicago truncatula
Medtr4g089100 2.0kb downstream 2.0kb downstream 7083 true chr4: 35723261-35730343 Medicago truncatula
Medtr4g089100 2.0kb downstream 2.0kb downstream 2000 false chr4: 35723261-35725260 Medicago truncatula
Medtr4g089100 5.0kb upstream 5.0kb upstream 10083 true chr4: 35725261-35735343 Medicago truncatula
Medtr4g089100 5.0kb upstream 5.0kb upstream 5000 false chr4: 35730344-35735343 Medicago truncatula
Medtr4g089100 5.0kb downstream 5.0kb downstream 10083 true chr4: 35720261-35730343 Medicago truncatula
Medtr4g089100 5.0kb downstream 5.0kb downstream 5000 false chr4: 35720261-35725260 Medicago truncatula
Medtr4g089100 10.0kb upstream 10.0kb upstream 15083 true chr4: 35725261-35740343 Medicago truncatula
Medtr4g089100 10.0kb upstream 10.0kb upstream 10000 false chr4: 35730344-35740343 Medicago truncatula
Medtr4g089100 10.0kb downstream 10.0kb downstream 15083 true chr4: 35715261-35730343 Medicago truncatula
Medtr4g089100 10.0kb downstream 10.0kb downstream 10000 false chr4: 35715261-35725260 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026895 5273 Angiosperm View MSA
122308002 5265 Fabidae View MSA
124063310 5270 Rosid View MSA
123738532 5271 Pentapetalae View MSA
122795984 5272 Eudicot View MSA
121349405 5274 Embryophyte View MSA
123381298 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.692       Low
cufflinks 3.115        
cufflinks 5.162       High
cufflinks 5.595       High
cufflinks 2.613        
cufflinks 5.135       High
cufflinks 3.783        
cufflinks 3.523        
cufflinks 2.209       Low

0 Strain