Gene : Medtr4g089105 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR12428//PTHR12428:SF23 - OXA1 Description:  60 kDa inner membrane protein
Genomic Order:  4509 Name:  ? Medtr4g089105
Secondary Identifier:  ? PAC:31109342
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g089105 0.5kb upstream 0.5kb upstream 7768 true chr4: 35733021-35740788 Medicago truncatula
Medtr4g089105 0.5kb upstream 0.5kb upstream 500 false chr4: 35733021-35733520 Medicago truncatula
Medtr4g089105 0.5kb downstream 0.5kb downstream 7768 true chr4: 35733521-35741288 Medicago truncatula
Medtr4g089105 0.5kb downstream 0.5kb downstream 500 false chr4: 35740789-35741288 Medicago truncatula
Medtr4g089105 1.0kb upstream 1.0kb upstream 8268 true chr4: 35732521-35740788 Medicago truncatula
Medtr4g089105 1.0kb upstream 1.0kb upstream 1000 false chr4: 35732521-35733520 Medicago truncatula
Medtr4g089105 1.0kb downstream 1.0kb downstream 8268 true chr4: 35733521-35741788 Medicago truncatula
Medtr4g089105 1.0kb downstream 1.0kb downstream 1000 false chr4: 35740789-35741788 Medicago truncatula
Medtr4g089105 2.0kb upstream 2.0kb upstream 9268 true chr4: 35731521-35740788 Medicago truncatula
Medtr4g089105 2.0kb upstream 2.0kb upstream 2000 false chr4: 35731521-35733520 Medicago truncatula
Medtr4g089105 2.0kb downstream 2.0kb downstream 9268 true chr4: 35733521-35742788 Medicago truncatula
Medtr4g089105 2.0kb downstream 2.0kb downstream 2000 false chr4: 35740789-35742788 Medicago truncatula
Medtr4g089105 5.0kb upstream 5.0kb upstream 12268 true chr4: 35728521-35740788 Medicago truncatula
Medtr4g089105 5.0kb upstream 5.0kb upstream 5000 false chr4: 35728521-35733520 Medicago truncatula
Medtr4g089105 5.0kb downstream 5.0kb downstream 12268 true chr4: 35733521-35745788 Medicago truncatula
Medtr4g089105 5.0kb downstream 5.0kb downstream 5000 false chr4: 35740789-35745788 Medicago truncatula
Medtr4g089105 10.0kb upstream 10.0kb upstream 17268 true chr4: 35723521-35740788 Medicago truncatula
Medtr4g089105 10.0kb upstream 10.0kb upstream 10000 false chr4: 35723521-35733520 Medicago truncatula
Medtr4g089105 10.0kb downstream 10.0kb downstream 17268 true chr4: 35733521-35750788 Medicago truncatula
Medtr4g089105 10.0kb downstream 10.0kb downstream 10000 false chr4: 35740789-35750788 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311244 5265 Fabidae View MSA
124065140 5270 Rosid View MSA
123750990 5271 Pentapetalae View MSA
122794726 5272 Eudicot View MSA
122051610 5273 Angiosperm View MSA
121347323 5274 Embryophyte View MSA
123428331 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.458        
cufflinks 2.702        
cufflinks 2.86        
cufflinks 1.403        
cufflinks 2.821        
cufflinks 1.028       Low
cufflinks 1.9        
cufflinks 2.4        
cufflinks 1.479        

0 Strain