Gene : Medtr4g089110 M. truncatula Mt4.0v1
Defline:  (1 of 1) KOG4796 - RNA polymerase II elongation factor Description:  hydroxyproline-rich glycoprotein family protein, putative
Genomic Order:  4510 Name:  ? Medtr4g089110
Secondary Identifier:  ? PAC:31115200
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0 Pathways

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g089110 0.5kb upstream 0.5kb upstream 4375 true chr4: 35742108-35746482 Medicago truncatula
Medtr4g089110 0.5kb upstream 0.5kb upstream 500 false chr4: 35745983-35746482 Medicago truncatula
Medtr4g089110 0.5kb downstream 0.5kb downstream 4375 true chr4: 35741608-35745982 Medicago truncatula
Medtr4g089110 0.5kb downstream 0.5kb downstream 500 false chr4: 35741608-35742107 Medicago truncatula
Medtr4g089110 1.0kb upstream 1.0kb upstream 4875 true chr4: 35742108-35746982 Medicago truncatula
Medtr4g089110 1.0kb upstream 1.0kb upstream 1000 false chr4: 35745983-35746982 Medicago truncatula
Medtr4g089110 1.0kb downstream 1.0kb downstream 4875 true chr4: 35741108-35745982 Medicago truncatula
Medtr4g089110 1.0kb downstream 1.0kb downstream 1000 false chr4: 35741108-35742107 Medicago truncatula
Medtr4g089110 2.0kb upstream 2.0kb upstream 5875 true chr4: 35742108-35747982 Medicago truncatula
Medtr4g089110 2.0kb upstream 2.0kb upstream 2000 false chr4: 35745983-35747982 Medicago truncatula
Medtr4g089110 2.0kb downstream 2.0kb downstream 5875 true chr4: 35740108-35745982 Medicago truncatula
Medtr4g089110 2.0kb downstream 2.0kb downstream 2000 false chr4: 35740108-35742107 Medicago truncatula
Medtr4g089110 5.0kb upstream 5.0kb upstream 8875 true chr4: 35742108-35750982 Medicago truncatula
Medtr4g089110 5.0kb upstream 5.0kb upstream 5000 false chr4: 35745983-35750982 Medicago truncatula
Medtr4g089110 5.0kb downstream 5.0kb downstream 8875 true chr4: 35737108-35745982 Medicago truncatula
Medtr4g089110 5.0kb downstream 5.0kb downstream 5000 false chr4: 35737108-35742107 Medicago truncatula
Medtr4g089110 10.0kb upstream 10.0kb upstream 13875 true chr4: 35742108-35755982 Medicago truncatula
Medtr4g089110 10.0kb upstream 10.0kb upstream 10000 false chr4: 35745983-35755982 Medicago truncatula
Medtr4g089110 10.0kb downstream 10.0kb downstream 13875 true chr4: 35732108-35745982 Medicago truncatula
Medtr4g089110 10.0kb downstream 10.0kb downstream 10000 false chr4: 35732108-35742107 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309174 5265 Fabidae View MSA
124069520 5270 Rosid View MSA
123747177 5271 Pentapetalae View MSA
122796256 5272 Eudicot View MSA
122048437 5273 Angiosperm View MSA
121310973 5274 Embryophyte View MSA
123427495 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.008     Low High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.003     Low  
cufflinks 0.004     Low  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain