Gene : Medtr4g090610 M. truncatula Mt4.0v1
Defline:  (1 of 6) 3.1.30.1 - Aspergillus nuclease S(1) / Single-stranded-nucleate endonuclease Description:  S1/P1 nuclease family protein
Genomic Order:  4535 Name:  ? Medtr4g090610
Secondary Identifier:  ? PAC:31113109
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g090610 0.5kb upstream 0.5kb upstream 5141 true chr4: 35930708-35935848 Medicago truncatula
Medtr4g090610 0.5kb upstream 0.5kb upstream 500 false chr4: 35935349-35935848 Medicago truncatula
Medtr4g090610 0.5kb downstream 0.5kb downstream 5141 true chr4: 35930208-35935348 Medicago truncatula
Medtr4g090610 0.5kb downstream 0.5kb downstream 500 false chr4: 35930208-35930707 Medicago truncatula
Medtr4g090610 1.0kb upstream 1.0kb upstream 5641 true chr4: 35930708-35936348 Medicago truncatula
Medtr4g090610 1.0kb upstream 1.0kb upstream 1000 false chr4: 35935349-35936348 Medicago truncatula
Medtr4g090610 1.0kb downstream 1.0kb downstream 5641 true chr4: 35929708-35935348 Medicago truncatula
Medtr4g090610 1.0kb downstream 1.0kb downstream 1000 false chr4: 35929708-35930707 Medicago truncatula
Medtr4g090610 2.0kb upstream 2.0kb upstream 6641 true chr4: 35930708-35937348 Medicago truncatula
Medtr4g090610 2.0kb upstream 2.0kb upstream 2000 false chr4: 35935349-35937348 Medicago truncatula
Medtr4g090610 2.0kb downstream 2.0kb downstream 6641 true chr4: 35928708-35935348 Medicago truncatula
Medtr4g090610 2.0kb downstream 2.0kb downstream 2000 false chr4: 35928708-35930707 Medicago truncatula
Medtr4g090610 5.0kb upstream 5.0kb upstream 9641 true chr4: 35930708-35940348 Medicago truncatula
Medtr4g090610 5.0kb upstream 5.0kb upstream 5000 false chr4: 35935349-35940348 Medicago truncatula
Medtr4g090610 5.0kb downstream 5.0kb downstream 9641 true chr4: 35925708-35935348 Medicago truncatula
Medtr4g090610 5.0kb downstream 5.0kb downstream 5000 false chr4: 35925708-35930707 Medicago truncatula
Medtr4g090610 10.0kb upstream 10.0kb upstream 14641 true chr4: 35930708-35945348 Medicago truncatula
Medtr4g090610 10.0kb upstream 10.0kb upstream 10000 false chr4: 35935349-35945348 Medicago truncatula
Medtr4g090610 10.0kb downstream 10.0kb downstream 14641 true chr4: 35920708-35935348 Medicago truncatula
Medtr4g090610 10.0kb downstream 10.0kb downstream 10000 false chr4: 35920708-35930707 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026417 5273 Angiosperm View MSA
122308616 5265 Fabidae View MSA
124066386 5270 Rosid View MSA
123737636 5271 Pentapetalae View MSA
122790228 5272 Eudicot View MSA
121350439 5274 Embryophyte View MSA
123381732 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.212        
cufflinks 0.196        
cufflinks 0.318       High
cufflinks 0.089        
cufflinks 0.239        
cufflinks 0.13     Low  
cufflinks 0.112        
cufflinks 0.226        
cufflinks 0.052     Low Low

0 Strain