Gene : Medtr4g091530 M. truncatula Mt4.0v1
Defline:  (1 of 52) PF00564 - PB1 domain (PB1) Description:  octicosapeptide/phox/Bem1p (PB1) domain protein
Genomic Order:  4583 Name:  ? Medtr4g091530
Secondary Identifier:  ? PAC:31109898
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g091530 0.5kb upstream 0.5kb upstream 2346 true chr4: 36274235-36276580 Medicago truncatula
Medtr4g091530 0.5kb upstream 0.5kb upstream 500 false chr4: 36274235-36274734 Medicago truncatula
Medtr4g091530 0.5kb downstream 0.5kb downstream 2346 true chr4: 36274735-36277080 Medicago truncatula
Medtr4g091530 0.5kb downstream 0.5kb downstream 500 false chr4: 36276581-36277080 Medicago truncatula
Medtr4g091530 1.0kb upstream 1.0kb upstream 2846 true chr4: 36273735-36276580 Medicago truncatula
Medtr4g091530 1.0kb upstream 1.0kb upstream 1000 false chr4: 36273735-36274734 Medicago truncatula
Medtr4g091530 1.0kb downstream 1.0kb downstream 2846 true chr4: 36274735-36277580 Medicago truncatula
Medtr4g091530 1.0kb downstream 1.0kb downstream 1000 false chr4: 36276581-36277580 Medicago truncatula
Medtr4g091530 2.0kb upstream 2.0kb upstream 3846 true chr4: 36272735-36276580 Medicago truncatula
Medtr4g091530 2.0kb upstream 2.0kb upstream 2000 false chr4: 36272735-36274734 Medicago truncatula
Medtr4g091530 2.0kb downstream 2.0kb downstream 3846 true chr4: 36274735-36278580 Medicago truncatula
Medtr4g091530 2.0kb downstream 2.0kb downstream 2000 false chr4: 36276581-36278580 Medicago truncatula
Medtr4g091530 5.0kb upstream 5.0kb upstream 6846 true chr4: 36269735-36276580 Medicago truncatula
Medtr4g091530 5.0kb upstream 5.0kb upstream 5000 false chr4: 36269735-36274734 Medicago truncatula
Medtr4g091530 5.0kb downstream 5.0kb downstream 6846 true chr4: 36274735-36281580 Medicago truncatula
Medtr4g091530 5.0kb downstream 5.0kb downstream 5000 false chr4: 36276581-36281580 Medicago truncatula
Medtr4g091530 10.0kb upstream 10.0kb upstream 11846 true chr4: 36264735-36276580 Medicago truncatula
Medtr4g091530 10.0kb upstream 10.0kb upstream 10000 false chr4: 36264735-36274734 Medicago truncatula
Medtr4g091530 10.0kb downstream 10.0kb downstream 11846 true chr4: 36274735-36286580 Medicago truncatula
Medtr4g091530 10.0kb downstream 10.0kb downstream 10000 false chr4: 36276581-36286580 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299118 5265 Fabidae View MSA
124050389 5270 Rosid View MSA
123750772 5271 Pentapetalae View MSA
122787571 5272 Eudicot View MSA
122050894 5273 Angiosperm View MSA
121312193 5274 Embryophyte View MSA
123349392 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.732     High  
cufflinks 37.872     High  
cufflinks 34.401     High  
cufflinks 44.834     High High
cufflinks 27.589     High  
cufflinks 13.031     High Low
cufflinks 17.454     High Low
cufflinks 30.9     High  
cufflinks 37.078     High  

0 Strain