Gene : Medtr4g102330 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR21588 - COILED-COIL-HELIX-COILED-COIL-HELIX DOMAIN CONTAINING 6 Description:  copper ion-binding protein, putative
Genomic Order:  5338 Name:  ? Medtr4g102330
Secondary Identifier:  ? PAC:31106614
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g102330 0.5kb upstream 0.5kb upstream 5276 true chr4: 42399876-42405151 Medicago truncatula
Medtr4g102330 0.5kb upstream 0.5kb upstream 500 false chr4: 42404652-42405151 Medicago truncatula
Medtr4g102330 0.5kb downstream 0.5kb downstream 5276 true chr4: 42399376-42404651 Medicago truncatula
Medtr4g102330 0.5kb downstream 0.5kb downstream 500 false chr4: 42399376-42399875 Medicago truncatula
Medtr4g102330 1.0kb upstream 1.0kb upstream 5776 true chr4: 42399876-42405651 Medicago truncatula
Medtr4g102330 1.0kb upstream 1.0kb upstream 1000 false chr4: 42404652-42405651 Medicago truncatula
Medtr4g102330 1.0kb downstream 1.0kb downstream 5776 true chr4: 42398876-42404651 Medicago truncatula
Medtr4g102330 1.0kb downstream 1.0kb downstream 1000 false chr4: 42398876-42399875 Medicago truncatula
Medtr4g102330 2.0kb upstream 2.0kb upstream 6776 true chr4: 42399876-42406651 Medicago truncatula
Medtr4g102330 2.0kb upstream 2.0kb upstream 2000 false chr4: 42404652-42406651 Medicago truncatula
Medtr4g102330 2.0kb downstream 2.0kb downstream 6776 true chr4: 42397876-42404651 Medicago truncatula
Medtr4g102330 2.0kb downstream 2.0kb downstream 2000 false chr4: 42397876-42399875 Medicago truncatula
Medtr4g102330 5.0kb upstream 5.0kb upstream 9776 true chr4: 42399876-42409651 Medicago truncatula
Medtr4g102330 5.0kb upstream 5.0kb upstream 5000 false chr4: 42404652-42409651 Medicago truncatula
Medtr4g102330 5.0kb downstream 5.0kb downstream 9776 true chr4: 42394876-42404651 Medicago truncatula
Medtr4g102330 5.0kb downstream 5.0kb downstream 5000 false chr4: 42394876-42399875 Medicago truncatula
Medtr4g102330 10.0kb upstream 10.0kb upstream 14776 true chr4: 42399876-42414651 Medicago truncatula
Medtr4g102330 10.0kb upstream 10.0kb upstream 10000 false chr4: 42404652-42414651 Medicago truncatula
Medtr4g102330 10.0kb downstream 10.0kb downstream 14776 true chr4: 42389876-42404651 Medicago truncatula
Medtr4g102330 10.0kb downstream 10.0kb downstream 10000 false chr4: 42389876-42399875 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308378 5265 Fabidae View MSA
124066354 5270 Rosid View MSA
123739449 5271 Pentapetalae View MSA
122789520 5272 Eudicot View MSA
122043061 5273 Angiosperm View MSA
121347219 5274 Embryophyte View MSA
123425883 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.688        
cufflinks 2.409        
cufflinks 2.638        
cufflinks 3.068        
cufflinks 2.946        
cufflinks 0.95       Low
cufflinks 2.429        
cufflinks 2.485        
cufflinks 3.193        

0 Strain