Gene : Medtr4g092090 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR28052:SF1 - UPF0545 PROTEIN C22ORF39 Description:  DUF3128 family protein
Genomic Order:  4621 Name:  ? Medtr4g092090
Secondary Identifier:  ? PAC:31110387
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g092090 0.5kb upstream 0.5kb upstream 4647 true chr4: 36555071-36559717 Medicago truncatula
Medtr4g092090 0.5kb upstream 0.5kb upstream 500 false chr4: 36559218-36559717 Medicago truncatula
Medtr4g092090 0.5kb downstream 0.5kb downstream 4647 true chr4: 36554571-36559217 Medicago truncatula
Medtr4g092090 0.5kb downstream 0.5kb downstream 500 false chr4: 36554571-36555070 Medicago truncatula
Medtr4g092090 1.0kb upstream 1.0kb upstream 5147 true chr4: 36555071-36560217 Medicago truncatula
Medtr4g092090 1.0kb upstream 1.0kb upstream 1000 false chr4: 36559218-36560217 Medicago truncatula
Medtr4g092090 1.0kb downstream 1.0kb downstream 5147 true chr4: 36554071-36559217 Medicago truncatula
Medtr4g092090 1.0kb downstream 1.0kb downstream 1000 false chr4: 36554071-36555070 Medicago truncatula
Medtr4g092090 2.0kb upstream 2.0kb upstream 6147 true chr4: 36555071-36561217 Medicago truncatula
Medtr4g092090 2.0kb upstream 2.0kb upstream 2000 false chr4: 36559218-36561217 Medicago truncatula
Medtr4g092090 2.0kb downstream 2.0kb downstream 6147 true chr4: 36553071-36559217 Medicago truncatula
Medtr4g092090 2.0kb downstream 2.0kb downstream 2000 false chr4: 36553071-36555070 Medicago truncatula
Medtr4g092090 5.0kb upstream 5.0kb upstream 9147 true chr4: 36555071-36564217 Medicago truncatula
Medtr4g092090 5.0kb upstream 5.0kb upstream 5000 false chr4: 36559218-36564217 Medicago truncatula
Medtr4g092090 5.0kb downstream 5.0kb downstream 9147 true chr4: 36550071-36559217 Medicago truncatula
Medtr4g092090 5.0kb downstream 5.0kb downstream 5000 false chr4: 36550071-36555070 Medicago truncatula
Medtr4g092090 10.0kb upstream 10.0kb upstream 14147 true chr4: 36555071-36569217 Medicago truncatula
Medtr4g092090 10.0kb upstream 10.0kb upstream 10000 false chr4: 36559218-36569217 Medicago truncatula
Medtr4g092090 10.0kb downstream 10.0kb downstream 14147 true chr4: 36545071-36559217 Medicago truncatula
Medtr4g092090 10.0kb downstream 10.0kb downstream 10000 false chr4: 36545071-36555070 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299583 5265 Fabidae View MSA
124067499 5270 Rosid View MSA
123746136 5271 Pentapetalae View MSA
122790093 5272 Eudicot View MSA
122047882 5273 Angiosperm View MSA
121343967 5274 Embryophyte View MSA
123425812 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.165        
cufflinks 0.264        
cufflinks 0.299        
cufflinks 0.104       Low
cufflinks 0.361       High
cufflinks 0.063     Low Low
cufflinks 0.192        
cufflinks 0.296        
cufflinks 0.215        

0 Strain