Gene : Medtr4g072910 M. truncatula Mt4.0v1
Defline:  (1 of 142) PF02519 - Auxin responsive protein (Auxin_inducible) Description:  SAUR-like auxin-responsive family protein
Genomic Order:  3404 Name:  ? Medtr4g072910
Secondary Identifier:  ? PAC:31114226
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g072910 0.5kb upstream 0.5kb upstream 1214 true chr4: 27576591-27577804 Medicago truncatula
Medtr4g072910 0.5kb upstream 0.5kb upstream 500 false chr4: 27576591-27577090 Medicago truncatula
Medtr4g072910 0.5kb downstream 0.5kb downstream 1214 true chr4: 27577091-27578304 Medicago truncatula
Medtr4g072910 0.5kb downstream 0.5kb downstream 500 false chr4: 27577805-27578304 Medicago truncatula
Medtr4g072910 1.0kb upstream 1.0kb upstream 1714 true chr4: 27576091-27577804 Medicago truncatula
Medtr4g072910 1.0kb upstream 1.0kb upstream 1000 false chr4: 27576091-27577090 Medicago truncatula
Medtr4g072910 1.0kb downstream 1.0kb downstream 1714 true chr4: 27577091-27578804 Medicago truncatula
Medtr4g072910 1.0kb downstream 1.0kb downstream 1000 false chr4: 27577805-27578804 Medicago truncatula
Medtr4g072910 2.0kb upstream 2.0kb upstream 2714 true chr4: 27575091-27577804 Medicago truncatula
Medtr4g072910 2.0kb upstream 2.0kb upstream 2000 false chr4: 27575091-27577090 Medicago truncatula
Medtr4g072910 2.0kb downstream 2.0kb downstream 2714 true chr4: 27577091-27579804 Medicago truncatula
Medtr4g072910 2.0kb downstream 2.0kb downstream 2000 false chr4: 27577805-27579804 Medicago truncatula
Medtr4g072910 5.0kb upstream 5.0kb upstream 5714 true chr4: 27572091-27577804 Medicago truncatula
Medtr4g072910 5.0kb upstream 5.0kb upstream 5000 false chr4: 27572091-27577090 Medicago truncatula
Medtr4g072910 5.0kb downstream 5.0kb downstream 5714 true chr4: 27577091-27582804 Medicago truncatula
Medtr4g072910 5.0kb downstream 5.0kb downstream 5000 false chr4: 27577805-27582804 Medicago truncatula
Medtr4g072910 10.0kb upstream 10.0kb upstream 10714 true chr4: 27567091-27577804 Medicago truncatula
Medtr4g072910 10.0kb upstream 10.0kb upstream 10000 false chr4: 27567091-27577090 Medicago truncatula
Medtr4g072910 10.0kb downstream 10.0kb downstream 10714 true chr4: 27577091-27587804 Medicago truncatula
Medtr4g072910 10.0kb downstream 10.0kb downstream 10000 false chr4: 27577805-27587804 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312618 5265 Fabidae View MSA
124073380 5270 Rosid View MSA
123753786 5271 Pentapetalae View MSA
122797448 5272 Eudicot View MSA
122051602 5273 Angiosperm View MSA
121351344 5274 Embryophyte View MSA
123382129 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.266       Low
cufflinks 2.255        
cufflinks 4.155        
cufflinks 1.736        
cufflinks 2.77        
cufflinks 0.549       Low
cufflinks 2.716        
cufflinks 3.462        
cufflinks 8.035       High

0 Strain