Gene : Medtr4g077783 M. truncatula Mt4.0v1
Defline:  (1 of 2) KOG2444 - WD40 repeat protein Description:  transducin/WD-40 repeat protein
Genomic Order:  3710 Name:  ? Medtr4g077783
Secondary Identifier:  ? PAC:31110887
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g077783 0.5kb upstream 0.5kb upstream 8322 true chr4: 29835238-29843559 Medicago truncatula
Medtr4g077783 0.5kb upstream 0.5kb upstream 500 false chr4: 29843060-29843559 Medicago truncatula
Medtr4g077783 0.5kb downstream 0.5kb downstream 8322 true chr4: 29834738-29843059 Medicago truncatula
Medtr4g077783 0.5kb downstream 0.5kb downstream 500 false chr4: 29834738-29835237 Medicago truncatula
Medtr4g077783 1.0kb upstream 1.0kb upstream 8822 true chr4: 29835238-29844059 Medicago truncatula
Medtr4g077783 1.0kb upstream 1.0kb upstream 1000 false chr4: 29843060-29844059 Medicago truncatula
Medtr4g077783 1.0kb downstream 1.0kb downstream 8822 true chr4: 29834238-29843059 Medicago truncatula
Medtr4g077783 1.0kb downstream 1.0kb downstream 1000 false chr4: 29834238-29835237 Medicago truncatula
Medtr4g077783 2.0kb upstream 2.0kb upstream 9822 true chr4: 29835238-29845059 Medicago truncatula
Medtr4g077783 2.0kb upstream 2.0kb upstream 2000 false chr4: 29843060-29845059 Medicago truncatula
Medtr4g077783 2.0kb downstream 2.0kb downstream 9822 true chr4: 29833238-29843059 Medicago truncatula
Medtr4g077783 2.0kb downstream 2.0kb downstream 2000 false chr4: 29833238-29835237 Medicago truncatula
Medtr4g077783 5.0kb upstream 5.0kb upstream 12822 true chr4: 29835238-29848059 Medicago truncatula
Medtr4g077783 5.0kb upstream 5.0kb upstream 5000 false chr4: 29843060-29848059 Medicago truncatula
Medtr4g077783 5.0kb downstream 5.0kb downstream 12822 true chr4: 29830238-29843059 Medicago truncatula
Medtr4g077783 5.0kb downstream 5.0kb downstream 5000 false chr4: 29830238-29835237 Medicago truncatula
Medtr4g077783 10.0kb upstream 10.0kb upstream 17822 true chr4: 29835238-29853059 Medicago truncatula
Medtr4g077783 10.0kb upstream 10.0kb upstream 10000 false chr4: 29843060-29853059 Medicago truncatula
Medtr4g077783 10.0kb downstream 10.0kb downstream 17822 true chr4: 29825238-29843059 Medicago truncatula
Medtr4g077783 10.0kb downstream 10.0kb downstream 10000 false chr4: 29825238-29835237 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026331 5273 Angiosperm View MSA
122262150 5265 Fabidae Singleton cluster - no MSA
124003415 5270 Rosid Singleton cluster - no MSA
123748270 5271 Pentapetalae View MSA
122796771 5272 Eudicot View MSA
121345084 5274 Embryophyte View MSA
123424015 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.5        
cufflinks 0.813        
cufflinks 0.674        
cufflinks 0.135        
cufflinks 0.768        
cufflinks 0.045     Low Low
cufflinks 0.285        
cufflinks 0.669        
cufflinks 0.207        

0 Strain