Gene : Medtr4g078505 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR15111 - RNA POLYMERASE II SUBUNIT 5-MEDIATING PROTEIN NNX3 Description:  prefoldin protein
Genomic Order:  3773 Name:  ? Medtr4g078505
Secondary Identifier:  ? PAC:31112377
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g078505 0.5kb upstream 0.5kb upstream 5795 true chr4: 30325705-30331499 Medicago truncatula
Medtr4g078505 0.5kb upstream 0.5kb upstream 500 false chr4: 30331000-30331499 Medicago truncatula
Medtr4g078505 0.5kb downstream 0.5kb downstream 5795 true chr4: 30325205-30330999 Medicago truncatula
Medtr4g078505 0.5kb downstream 0.5kb downstream 500 false chr4: 30325205-30325704 Medicago truncatula
Medtr4g078505 1.0kb upstream 1.0kb upstream 6295 true chr4: 30325705-30331999 Medicago truncatula
Medtr4g078505 1.0kb upstream 1.0kb upstream 1000 false chr4: 30331000-30331999 Medicago truncatula
Medtr4g078505 1.0kb downstream 1.0kb downstream 6295 true chr4: 30324705-30330999 Medicago truncatula
Medtr4g078505 1.0kb downstream 1.0kb downstream 1000 false chr4: 30324705-30325704 Medicago truncatula
Medtr4g078505 2.0kb upstream 2.0kb upstream 7295 true chr4: 30325705-30332999 Medicago truncatula
Medtr4g078505 2.0kb upstream 2.0kb upstream 2000 false chr4: 30331000-30332999 Medicago truncatula
Medtr4g078505 2.0kb downstream 2.0kb downstream 7295 true chr4: 30323705-30330999 Medicago truncatula
Medtr4g078505 2.0kb downstream 2.0kb downstream 2000 false chr4: 30323705-30325704 Medicago truncatula
Medtr4g078505 5.0kb upstream 5.0kb upstream 10295 true chr4: 30325705-30335999 Medicago truncatula
Medtr4g078505 5.0kb upstream 5.0kb upstream 5000 false chr4: 30331000-30335999 Medicago truncatula
Medtr4g078505 5.0kb downstream 5.0kb downstream 10295 true chr4: 30320705-30330999 Medicago truncatula
Medtr4g078505 5.0kb downstream 5.0kb downstream 5000 false chr4: 30320705-30325704 Medicago truncatula
Medtr4g078505 10.0kb upstream 10.0kb upstream 15295 true chr4: 30325705-30340999 Medicago truncatula
Medtr4g078505 10.0kb upstream 10.0kb upstream 10000 false chr4: 30331000-30340999 Medicago truncatula
Medtr4g078505 10.0kb downstream 10.0kb downstream 15295 true chr4: 30315705-30330999 Medicago truncatula
Medtr4g078505 10.0kb downstream 10.0kb downstream 10000 false chr4: 30315705-30325704 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041391 5273 Angiosperm View MSA
122302090 5265 Fabidae View MSA
124060568 5270 Rosid View MSA
123741062 5271 Pentapetalae View MSA
122788086 5272 Eudicot View MSA
121345968 5274 Embryophyte View MSA
123425658 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.484        
cufflinks 0.386        
cufflinks 0.425        
cufflinks 0.167        
cufflinks 0.535        
cufflinks 0.023     Low Low
cufflinks 0.272        
cufflinks 0.368        
cufflinks 0.313        

0 Strain