Gene : Medtr4g078417 M. truncatula Mt4.0v1
Defline:  (1 of 15) PF03007//PF06974 - Wax ester synthase-like Acyl-CoA acyltransferase domain (WES_acyltransf) // Protein of unknown function (DUF1298) (DUF1298) Description:  O-acyltransferase WSD1-like protein
Genomic Order:  3766 Name:  ? Medtr4g078417
Secondary Identifier:  ? PAC:31109527
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g078417 0.5kb upstream 0.5kb upstream 4256 true chr4: 30268191-30272446 Medicago truncatula
Medtr4g078417 0.5kb upstream 0.5kb upstream 500 false chr4: 30271947-30272446 Medicago truncatula
Medtr4g078417 0.5kb downstream 0.5kb downstream 4256 true chr4: 30267691-30271946 Medicago truncatula
Medtr4g078417 0.5kb downstream 0.5kb downstream 500 false chr4: 30267691-30268190 Medicago truncatula
Medtr4g078417 1.0kb upstream 1.0kb upstream 4756 true chr4: 30268191-30272946 Medicago truncatula
Medtr4g078417 1.0kb upstream 1.0kb upstream 1000 false chr4: 30271947-30272946 Medicago truncatula
Medtr4g078417 1.0kb downstream 1.0kb downstream 4756 true chr4: 30267191-30271946 Medicago truncatula
Medtr4g078417 1.0kb downstream 1.0kb downstream 1000 false chr4: 30267191-30268190 Medicago truncatula
Medtr4g078417 2.0kb upstream 2.0kb upstream 5756 true chr4: 30268191-30273946 Medicago truncatula
Medtr4g078417 2.0kb upstream 2.0kb upstream 2000 false chr4: 30271947-30273946 Medicago truncatula
Medtr4g078417 2.0kb downstream 2.0kb downstream 5756 true chr4: 30266191-30271946 Medicago truncatula
Medtr4g078417 2.0kb downstream 2.0kb downstream 2000 false chr4: 30266191-30268190 Medicago truncatula
Medtr4g078417 5.0kb upstream 5.0kb upstream 8756 true chr4: 30268191-30276946 Medicago truncatula
Medtr4g078417 5.0kb upstream 5.0kb upstream 5000 false chr4: 30271947-30276946 Medicago truncatula
Medtr4g078417 5.0kb downstream 5.0kb downstream 8756 true chr4: 30263191-30271946 Medicago truncatula
Medtr4g078417 5.0kb downstream 5.0kb downstream 5000 false chr4: 30263191-30268190 Medicago truncatula
Medtr4g078417 10.0kb upstream 10.0kb upstream 13756 true chr4: 30268191-30281946 Medicago truncatula
Medtr4g078417 10.0kb upstream 10.0kb upstream 10000 false chr4: 30271947-30281946 Medicago truncatula
Medtr4g078417 10.0kb downstream 10.0kb downstream 13756 true chr4: 30258191-30271946 Medicago truncatula
Medtr4g078417 10.0kb downstream 10.0kb downstream 10000 false chr4: 30258191-30268190 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313899 5265 Fabidae View MSA
124072323 5270 Rosid View MSA
123749190 5271 Pentapetalae View MSA
122797420 5272 Eudicot View MSA
122048260 5273 Angiosperm View MSA
123428993 5275 Viridiplantae View MSA
121310908 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.786       High
cufflinks 0.523        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.869        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.534        
cufflinks 0.0     Not Expressed Not Expressed

0 Strain