Gene : Medtr4g078230 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR31451:SF1 - MANNAN ENDO-1,4-BETA-MANNOSIDASE 2-RELATED Description:  glycoside hydrolase family 5 protein
Genomic Order:  3749 Name:  ? Medtr4g078230
Secondary Identifier:  ? PAC:31115182
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g078230 0.5kb upstream 0.5kb upstream 4773 true chr4: 30126565-30131337 Medicago truncatula
Medtr4g078230 0.5kb upstream 0.5kb upstream 500 false chr4: 30130838-30131337 Medicago truncatula
Medtr4g078230 0.5kb downstream 0.5kb downstream 4773 true chr4: 30126065-30130837 Medicago truncatula
Medtr4g078230 0.5kb downstream 0.5kb downstream 500 false chr4: 30126065-30126564 Medicago truncatula
Medtr4g078230 1.0kb upstream 1.0kb upstream 5273 true chr4: 30126565-30131837 Medicago truncatula
Medtr4g078230 1.0kb upstream 1.0kb upstream 1000 false chr4: 30130838-30131837 Medicago truncatula
Medtr4g078230 1.0kb downstream 1.0kb downstream 5273 true chr4: 30125565-30130837 Medicago truncatula
Medtr4g078230 1.0kb downstream 1.0kb downstream 1000 false chr4: 30125565-30126564 Medicago truncatula
Medtr4g078230 2.0kb upstream 2.0kb upstream 6273 true chr4: 30126565-30132837 Medicago truncatula
Medtr4g078230 2.0kb upstream 2.0kb upstream 2000 false chr4: 30130838-30132837 Medicago truncatula
Medtr4g078230 2.0kb downstream 2.0kb downstream 6273 true chr4: 30124565-30130837 Medicago truncatula
Medtr4g078230 2.0kb downstream 2.0kb downstream 2000 false chr4: 30124565-30126564 Medicago truncatula
Medtr4g078230 5.0kb upstream 5.0kb upstream 9273 true chr4: 30126565-30135837 Medicago truncatula
Medtr4g078230 5.0kb upstream 5.0kb upstream 5000 false chr4: 30130838-30135837 Medicago truncatula
Medtr4g078230 5.0kb downstream 5.0kb downstream 9273 true chr4: 30121565-30130837 Medicago truncatula
Medtr4g078230 5.0kb downstream 5.0kb downstream 5000 false chr4: 30121565-30126564 Medicago truncatula
Medtr4g078230 10.0kb upstream 10.0kb upstream 14273 true chr4: 30126565-30140837 Medicago truncatula
Medtr4g078230 10.0kb upstream 10.0kb upstream 10000 false chr4: 30130838-30140837 Medicago truncatula
Medtr4g078230 10.0kb downstream 10.0kb downstream 14273 true chr4: 30116565-30130837 Medicago truncatula
Medtr4g078230 10.0kb downstream 10.0kb downstream 10000 false chr4: 30116565-30126564 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314019 5265 Fabidae View MSA
124068512 5270 Rosid View MSA
123745616 5271 Pentapetalae View MSA
122797757 5272 Eudicot View MSA
122048761 5273 Angiosperm View MSA
121348976 5274 Embryophyte View MSA
123428551 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.719        
cufflinks 1.516        
cufflinks 1.523        
cufflinks 0.566        
cufflinks 2.685        
cufflinks 0.094     Low Low
cufflinks 1.31        
cufflinks 1.257        
cufflinks 1.465        

0 Strain