Gene : Medtr4g078850 M. truncatula Mt4.0v1
Defline:  (1 of 5) PTHR24078:SF188 - DNAJ HEAT SHOCK PROTEIN Description:  DnaJ heat shock family protein
Genomic Order:  3796 Name:  ? Medtr4g078850
Secondary Identifier:  ? PAC:31108452
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g078850 0.5kb upstream 0.5kb upstream 3191 true chr4: 30479090-30482280 Medicago truncatula
Medtr4g078850 0.5kb upstream 0.5kb upstream 500 false chr4: 30479090-30479589 Medicago truncatula
Medtr4g078850 0.5kb downstream 0.5kb downstream 3191 true chr4: 30479590-30482780 Medicago truncatula
Medtr4g078850 0.5kb downstream 0.5kb downstream 500 false chr4: 30482281-30482780 Medicago truncatula
Medtr4g078850 1.0kb upstream 1.0kb upstream 3691 true chr4: 30478590-30482280 Medicago truncatula
Medtr4g078850 1.0kb upstream 1.0kb upstream 1000 false chr4: 30478590-30479589 Medicago truncatula
Medtr4g078850 1.0kb downstream 1.0kb downstream 3691 true chr4: 30479590-30483280 Medicago truncatula
Medtr4g078850 1.0kb downstream 1.0kb downstream 1000 false chr4: 30482281-30483280 Medicago truncatula
Medtr4g078850 2.0kb upstream 2.0kb upstream 4691 true chr4: 30477590-30482280 Medicago truncatula
Medtr4g078850 2.0kb upstream 2.0kb upstream 2000 false chr4: 30477590-30479589 Medicago truncatula
Medtr4g078850 2.0kb downstream 2.0kb downstream 4691 true chr4: 30479590-30484280 Medicago truncatula
Medtr4g078850 2.0kb downstream 2.0kb downstream 2000 false chr4: 30482281-30484280 Medicago truncatula
Medtr4g078850 5.0kb upstream 5.0kb upstream 7691 true chr4: 30474590-30482280 Medicago truncatula
Medtr4g078850 5.0kb upstream 5.0kb upstream 5000 false chr4: 30474590-30479589 Medicago truncatula
Medtr4g078850 5.0kb downstream 5.0kb downstream 7691 true chr4: 30479590-30487280 Medicago truncatula
Medtr4g078850 5.0kb downstream 5.0kb downstream 5000 false chr4: 30482281-30487280 Medicago truncatula
Medtr4g078850 10.0kb upstream 10.0kb upstream 12691 true chr4: 30469590-30482280 Medicago truncatula
Medtr4g078850 10.0kb upstream 10.0kb upstream 10000 false chr4: 30469590-30479589 Medicago truncatula
Medtr4g078850 10.0kb downstream 10.0kb downstream 12691 true chr4: 30479590-30492280 Medicago truncatula
Medtr4g078850 10.0kb downstream 10.0kb downstream 10000 false chr4: 30482281-30492280 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315124 5265 Fabidae View MSA
124063885 5270 Rosid View MSA
123747669 5271 Pentapetalae View MSA
122796849 5272 Eudicot View MSA
122043533 5273 Angiosperm View MSA
123429128 5275 Viridiplantae View MSA
121350390 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.187     High High
cufflinks 3.137        
cufflinks 2.884        
cufflinks 0.749       Low
cufflinks 3.58        
cufflinks 2.713        
cufflinks 7.26        
cufflinks 2.269        
cufflinks 4.81        

0 Strain