Gene : Medtr4g078740 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR10994:SF61 - RETICULON-LIKE PROTEIN Description:  reticulon-like protein B2
Genomic Order:  3786 Name:  ? Medtr4g078740
Secondary Identifier:  ? PAC:31114643
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g078740 0.5kb upstream 0.5kb upstream 2964 true chr4: 30430055-30433018 Medicago truncatula
Medtr4g078740 0.5kb upstream 0.5kb upstream 500 false chr4: 30430055-30430554 Medicago truncatula
Medtr4g078740 0.5kb downstream 0.5kb downstream 2964 true chr4: 30430555-30433518 Medicago truncatula
Medtr4g078740 0.5kb downstream 0.5kb downstream 500 false chr4: 30433019-30433518 Medicago truncatula
Medtr4g078740 1.0kb upstream 1.0kb upstream 3464 true chr4: 30429555-30433018 Medicago truncatula
Medtr4g078740 1.0kb upstream 1.0kb upstream 1000 false chr4: 30429555-30430554 Medicago truncatula
Medtr4g078740 1.0kb downstream 1.0kb downstream 3464 true chr4: 30430555-30434018 Medicago truncatula
Medtr4g078740 1.0kb downstream 1.0kb downstream 1000 false chr4: 30433019-30434018 Medicago truncatula
Medtr4g078740 2.0kb upstream 2.0kb upstream 4464 true chr4: 30428555-30433018 Medicago truncatula
Medtr4g078740 2.0kb upstream 2.0kb upstream 2000 false chr4: 30428555-30430554 Medicago truncatula
Medtr4g078740 2.0kb downstream 2.0kb downstream 4464 true chr4: 30430555-30435018 Medicago truncatula
Medtr4g078740 2.0kb downstream 2.0kb downstream 2000 false chr4: 30433019-30435018 Medicago truncatula
Medtr4g078740 5.0kb upstream 5.0kb upstream 7464 true chr4: 30425555-30433018 Medicago truncatula
Medtr4g078740 5.0kb upstream 5.0kb upstream 5000 false chr4: 30425555-30430554 Medicago truncatula
Medtr4g078740 5.0kb downstream 5.0kb downstream 7464 true chr4: 30430555-30438018 Medicago truncatula
Medtr4g078740 5.0kb downstream 5.0kb downstream 5000 false chr4: 30433019-30438018 Medicago truncatula
Medtr4g078740 10.0kb upstream 10.0kb upstream 12464 true chr4: 30420555-30433018 Medicago truncatula
Medtr4g078740 10.0kb upstream 10.0kb upstream 10000 false chr4: 30420555-30430554 Medicago truncatula
Medtr4g078740 10.0kb downstream 10.0kb downstream 12464 true chr4: 30430555-30443018 Medicago truncatula
Medtr4g078740 10.0kb downstream 10.0kb downstream 10000 false chr4: 30433019-30443018 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311875 5265 Fabidae View MSA
124065493 5270 Rosid View MSA
123740273 5271 Pentapetalae View MSA
122786766 5272 Eudicot View MSA
122045341 5273 Angiosperm View MSA
121349821 5274 Embryophyte View MSA
123424485 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.091       Low
cufflinks 0.382        
cufflinks 0.244        
cufflinks 0.19        
cufflinks 0.266        
cufflinks 0.099     Low Low
cufflinks 0.995       High
cufflinks 0.425        
cufflinks 1.844       High

0 Strain