Gene : Medtr4g079500 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR13301:SF69 - BASIC HELIX-LOOP-HELIX DOMAIN-CONTAINING PROTEIN Description:  bZIP family transcription factor
Genomic Order:  3835 Name:  ? Medtr4g079500
Secondary Identifier:  ? PAC:31113460
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g079500 0.5kb upstream 0.5kb upstream 3430 true chr4: 30728605-30732034 Medicago truncatula
Medtr4g079500 0.5kb upstream 0.5kb upstream 500 false chr4: 30728605-30729104 Medicago truncatula
Medtr4g079500 0.5kb downstream 0.5kb downstream 3430 true chr4: 30729105-30732534 Medicago truncatula
Medtr4g079500 0.5kb downstream 0.5kb downstream 500 false chr4: 30732035-30732534 Medicago truncatula
Medtr4g079500 1.0kb upstream 1.0kb upstream 3930 true chr4: 30728105-30732034 Medicago truncatula
Medtr4g079500 1.0kb upstream 1.0kb upstream 1000 false chr4: 30728105-30729104 Medicago truncatula
Medtr4g079500 1.0kb downstream 1.0kb downstream 3930 true chr4: 30729105-30733034 Medicago truncatula
Medtr4g079500 1.0kb downstream 1.0kb downstream 1000 false chr4: 30732035-30733034 Medicago truncatula
Medtr4g079500 2.0kb upstream 2.0kb upstream 4930 true chr4: 30727105-30732034 Medicago truncatula
Medtr4g079500 2.0kb upstream 2.0kb upstream 2000 false chr4: 30727105-30729104 Medicago truncatula
Medtr4g079500 2.0kb downstream 2.0kb downstream 4930 true chr4: 30729105-30734034 Medicago truncatula
Medtr4g079500 2.0kb downstream 2.0kb downstream 2000 false chr4: 30732035-30734034 Medicago truncatula
Medtr4g079500 5.0kb upstream 5.0kb upstream 7930 true chr4: 30724105-30732034 Medicago truncatula
Medtr4g079500 5.0kb upstream 5.0kb upstream 5000 false chr4: 30724105-30729104 Medicago truncatula
Medtr4g079500 5.0kb downstream 5.0kb downstream 7930 true chr4: 30729105-30737034 Medicago truncatula
Medtr4g079500 5.0kb downstream 5.0kb downstream 5000 false chr4: 30732035-30737034 Medicago truncatula
Medtr4g079500 10.0kb upstream 10.0kb upstream 12930 true chr4: 30719105-30732034 Medicago truncatula
Medtr4g079500 10.0kb upstream 10.0kb upstream 10000 false chr4: 30719105-30729104 Medicago truncatula
Medtr4g079500 10.0kb downstream 10.0kb downstream 12930 true chr4: 30729105-30742034 Medicago truncatula
Medtr4g079500 10.0kb downstream 10.0kb downstream 10000 false chr4: 30732035-30742034 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312955 5265 Fabidae View MSA
124069562 5270 Rosid View MSA
123743912 5271 Pentapetalae View MSA
122795222 5272 Eudicot View MSA
122050471 5273 Angiosperm View MSA
123428913 5275 Viridiplantae View MSA
121350837 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.628       Low
cufflinks 2.078        
cufflinks 2.355        
cufflinks 2.061        
cufflinks 4.727       High
cufflinks 1.933        
cufflinks 5.11       High
cufflinks 1.648        
cufflinks 3.181        

0 Strain