Gene : Medtr4g080270 M. truncatula Mt4.0v1
Defline:  (1 of 32) PF01107 - Viral movement protein (MP) (MP) Description:  viral movement protein
Genomic Order:  3887 Name:  ? Medtr4g080270
Secondary Identifier:  ? PAC:31113142
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0 Pathways

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g080270 0.5kb upstream 0.5kb upstream 881 true chr4: 31133045-31133925 Medicago truncatula
Medtr4g080270 0.5kb upstream 0.5kb upstream 500 false chr4: 31133045-31133544 Medicago truncatula
Medtr4g080270 0.5kb downstream 0.5kb downstream 881 true chr4: 31133545-31134425 Medicago truncatula
Medtr4g080270 0.5kb downstream 0.5kb downstream 500 false chr4: 31133926-31134425 Medicago truncatula
Medtr4g080270 1.0kb upstream 1.0kb upstream 1381 true chr4: 31132545-31133925 Medicago truncatula
Medtr4g080270 1.0kb upstream 1.0kb upstream 1000 false chr4: 31132545-31133544 Medicago truncatula
Medtr4g080270 1.0kb downstream 1.0kb downstream 1381 true chr4: 31133545-31134925 Medicago truncatula
Medtr4g080270 1.0kb downstream 1.0kb downstream 1000 false chr4: 31133926-31134925 Medicago truncatula
Medtr4g080270 2.0kb upstream 2.0kb upstream 2381 true chr4: 31131545-31133925 Medicago truncatula
Medtr4g080270 2.0kb upstream 2.0kb upstream 2000 false chr4: 31131545-31133544 Medicago truncatula
Medtr4g080270 2.0kb downstream 2.0kb downstream 2381 true chr4: 31133545-31135925 Medicago truncatula
Medtr4g080270 2.0kb downstream 2.0kb downstream 2000 false chr4: 31133926-31135925 Medicago truncatula
Medtr4g080270 5.0kb upstream 5.0kb upstream 5381 true chr4: 31128545-31133925 Medicago truncatula
Medtr4g080270 5.0kb upstream 5.0kb upstream 5000 false chr4: 31128545-31133544 Medicago truncatula
Medtr4g080270 5.0kb downstream 5.0kb downstream 5381 true chr4: 31133545-31138925 Medicago truncatula
Medtr4g080270 5.0kb downstream 5.0kb downstream 5000 false chr4: 31133926-31138925 Medicago truncatula
Medtr4g080270 10.0kb upstream 10.0kb upstream 10381 true chr4: 31123545-31133925 Medicago truncatula
Medtr4g080270 10.0kb upstream 10.0kb upstream 10000 false chr4: 31123545-31133544 Medicago truncatula
Medtr4g080270 10.0kb downstream 10.0kb downstream 10381 true chr4: 31133545-31143925 Medicago truncatula
Medtr4g080270 10.0kb downstream 10.0kb downstream 10000 false chr4: 31133926-31143925 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028362 5273 Angiosperm View MSA
122288761 5265 Fabidae View MSA
124028953 5270 Rosid View MSA
123751157 5271 Pentapetalae View MSA
122773930 5272 Eudicot View MSA
121297863 5274 Embryophyte View MSA
123335877 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain