Gene : Medtr4g079960 M. truncatula Mt4.0v1
Defline:  (1 of 19) KOG4282 - Transcription factor GT-2 and related proteins, contains trihelix DNA-binding/SANT domain Description:  sequence-specific DNA-binding transcription factors protein, putative
Genomic Order:  3865 Name:  ? Medtr4g079960
Secondary Identifier:  ? PAC:31106359
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g079960 0.5kb upstream 0.5kb upstream 3822 true chr4: 30954949-30958770 Medicago truncatula
Medtr4g079960 0.5kb upstream 0.5kb upstream 500 false chr4: 30958271-30958770 Medicago truncatula
Medtr4g079960 0.5kb downstream 0.5kb downstream 3822 true chr4: 30954449-30958270 Medicago truncatula
Medtr4g079960 0.5kb downstream 0.5kb downstream 500 false chr4: 30954449-30954948 Medicago truncatula
Medtr4g079960 1.0kb upstream 1.0kb upstream 4322 true chr4: 30954949-30959270 Medicago truncatula
Medtr4g079960 1.0kb upstream 1.0kb upstream 1000 false chr4: 30958271-30959270 Medicago truncatula
Medtr4g079960 1.0kb downstream 1.0kb downstream 4322 true chr4: 30953949-30958270 Medicago truncatula
Medtr4g079960 1.0kb downstream 1.0kb downstream 1000 false chr4: 30953949-30954948 Medicago truncatula
Medtr4g079960 2.0kb upstream 2.0kb upstream 5322 true chr4: 30954949-30960270 Medicago truncatula
Medtr4g079960 2.0kb upstream 2.0kb upstream 2000 false chr4: 30958271-30960270 Medicago truncatula
Medtr4g079960 2.0kb downstream 2.0kb downstream 5322 true chr4: 30952949-30958270 Medicago truncatula
Medtr4g079960 2.0kb downstream 2.0kb downstream 2000 false chr4: 30952949-30954948 Medicago truncatula
Medtr4g079960 5.0kb upstream 5.0kb upstream 8322 true chr4: 30954949-30963270 Medicago truncatula
Medtr4g079960 5.0kb upstream 5.0kb upstream 5000 false chr4: 30958271-30963270 Medicago truncatula
Medtr4g079960 5.0kb downstream 5.0kb downstream 8322 true chr4: 30949949-30958270 Medicago truncatula
Medtr4g079960 5.0kb downstream 5.0kb downstream 5000 false chr4: 30949949-30954948 Medicago truncatula
Medtr4g079960 10.0kb upstream 10.0kb upstream 13322 true chr4: 30954949-30968270 Medicago truncatula
Medtr4g079960 10.0kb upstream 10.0kb upstream 10000 false chr4: 30958271-30968270 Medicago truncatula
Medtr4g079960 10.0kb downstream 10.0kb downstream 13322 true chr4: 30944949-30958270 Medicago truncatula
Medtr4g079960 10.0kb downstream 10.0kb downstream 10000 false chr4: 30944949-30954948 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305596 5265 Fabidae View MSA
124073016 5270 Rosid View MSA
123747024 5271 Pentapetalae View MSA
122797594 5272 Eudicot View MSA
122048204 5273 Angiosperm View MSA
121351505 5274 Embryophyte View MSA
123382195 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.859        
cufflinks 1.106        
cufflinks 1.306        
cufflinks 1.168        
cufflinks 1.011        
cufflinks 0.408       Low
cufflinks 0.79        
cufflinks 1.291        
cufflinks 0.997        

0 Strain