Gene : Medtr4g079760 M. truncatula Mt4.0v1
Defline:  (1 of 5) PTHR12565//PTHR12565:SF82 - STEROL REGULATORY ELEMENT-BINDING PROTEIN Description:  transcription factor bHLH107-like protein
Genomic Order:  3855 Name:  ? Medtr4g079760
Secondary Identifier:  ? PAC:31107297
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g079760 0.5kb upstream 0.5kb upstream 3080 true chr4: 30875593-30878672 Medicago truncatula
Medtr4g079760 0.5kb upstream 0.5kb upstream 500 false chr4: 30878173-30878672 Medicago truncatula
Medtr4g079760 0.5kb downstream 0.5kb downstream 3080 true chr4: 30875093-30878172 Medicago truncatula
Medtr4g079760 0.5kb downstream 0.5kb downstream 500 false chr4: 30875093-30875592 Medicago truncatula
Medtr4g079760 1.0kb upstream 1.0kb upstream 3580 true chr4: 30875593-30879172 Medicago truncatula
Medtr4g079760 1.0kb upstream 1.0kb upstream 1000 false chr4: 30878173-30879172 Medicago truncatula
Medtr4g079760 1.0kb downstream 1.0kb downstream 3580 true chr4: 30874593-30878172 Medicago truncatula
Medtr4g079760 1.0kb downstream 1.0kb downstream 1000 false chr4: 30874593-30875592 Medicago truncatula
Medtr4g079760 2.0kb upstream 2.0kb upstream 4580 true chr4: 30875593-30880172 Medicago truncatula
Medtr4g079760 2.0kb upstream 2.0kb upstream 2000 false chr4: 30878173-30880172 Medicago truncatula
Medtr4g079760 2.0kb downstream 2.0kb downstream 4580 true chr4: 30873593-30878172 Medicago truncatula
Medtr4g079760 2.0kb downstream 2.0kb downstream 2000 false chr4: 30873593-30875592 Medicago truncatula
Medtr4g079760 5.0kb upstream 5.0kb upstream 7580 true chr4: 30875593-30883172 Medicago truncatula
Medtr4g079760 5.0kb upstream 5.0kb upstream 5000 false chr4: 30878173-30883172 Medicago truncatula
Medtr4g079760 5.0kb downstream 5.0kb downstream 7580 true chr4: 30870593-30878172 Medicago truncatula
Medtr4g079760 5.0kb downstream 5.0kb downstream 5000 false chr4: 30870593-30875592 Medicago truncatula
Medtr4g079760 10.0kb upstream 10.0kb upstream 12580 true chr4: 30875593-30888172 Medicago truncatula
Medtr4g079760 10.0kb upstream 10.0kb upstream 10000 false chr4: 30878173-30888172 Medicago truncatula
Medtr4g079760 10.0kb downstream 10.0kb downstream 12580 true chr4: 30865593-30878172 Medicago truncatula
Medtr4g079760 10.0kb downstream 10.0kb downstream 10000 false chr4: 30865593-30875592 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297355 5265 Fabidae View MSA
124070822 5270 Rosid View MSA
123748515 5271 Pentapetalae View MSA
122793981 5272 Eudicot View MSA
122048947 5273 Angiosperm View MSA
121351451 5274 Embryophyte View MSA
123428440 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.167        
cufflinks 0.02     Low  
cufflinks 0.035     Low  
cufflinks 0.092        
cufflinks 0.047     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.328       High
cufflinks 0.011     Low Low
cufflinks 0.552       High

0 Strain