Gene : Medtr4g079780 M. truncatula Mt4.0v1
Defline:  (1 of 2) 1.1.1.86 - Ketol-acid reductoisomerase (NADP(+)) / Dihydroxyisovalerate dehydrogenase (isomerizing) Description:  ketol-acid reductoisomerase
Genomic Order:  3857 Name:  ? Medtr4g079780
Secondary Identifier:  ? PAC:31115230
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4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula BRANCHED-CHAIN-AA-SYN-PWY Medicago truncatula pathologic  
Mtruncatula ILEUSYN-PWY Medicago truncatula pathologic  
Mtruncatula PWY-3001 Medicago truncatula pathologic  
Mtruncatula VALSYN-PWY Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g079780 0.5kb upstream 0.5kb upstream 4985 true chr4: 30882510-30887494 Medicago truncatula
Medtr4g079780 0.5kb upstream 0.5kb upstream 500 false chr4: 30886995-30887494 Medicago truncatula
Medtr4g079780 0.5kb downstream 0.5kb downstream 4985 true chr4: 30882010-30886994 Medicago truncatula
Medtr4g079780 0.5kb downstream 0.5kb downstream 500 false chr4: 30882010-30882509 Medicago truncatula
Medtr4g079780 1.0kb upstream 1.0kb upstream 5485 true chr4: 30882510-30887994 Medicago truncatula
Medtr4g079780 1.0kb upstream 1.0kb upstream 1000 false chr4: 30886995-30887994 Medicago truncatula
Medtr4g079780 1.0kb downstream 1.0kb downstream 5485 true chr4: 30881510-30886994 Medicago truncatula
Medtr4g079780 1.0kb downstream 1.0kb downstream 1000 false chr4: 30881510-30882509 Medicago truncatula
Medtr4g079780 2.0kb upstream 2.0kb upstream 6485 true chr4: 30882510-30888994 Medicago truncatula
Medtr4g079780 2.0kb upstream 2.0kb upstream 2000 false chr4: 30886995-30888994 Medicago truncatula
Medtr4g079780 2.0kb downstream 2.0kb downstream 6485 true chr4: 30880510-30886994 Medicago truncatula
Medtr4g079780 2.0kb downstream 2.0kb downstream 2000 false chr4: 30880510-30882509 Medicago truncatula
Medtr4g079780 5.0kb upstream 5.0kb upstream 9485 true chr4: 30882510-30891994 Medicago truncatula
Medtr4g079780 5.0kb upstream 5.0kb upstream 5000 false chr4: 30886995-30891994 Medicago truncatula
Medtr4g079780 5.0kb downstream 5.0kb downstream 9485 true chr4: 30877510-30886994 Medicago truncatula
Medtr4g079780 5.0kb downstream 5.0kb downstream 5000 false chr4: 30877510-30882509 Medicago truncatula
Medtr4g079780 10.0kb upstream 10.0kb upstream 14485 true chr4: 30882510-30896994 Medicago truncatula
Medtr4g079780 10.0kb upstream 10.0kb upstream 10000 false chr4: 30886995-30896994 Medicago truncatula
Medtr4g079780 10.0kb downstream 10.0kb downstream 14485 true chr4: 30872510-30886994 Medicago truncatula
Medtr4g079780 10.0kb downstream 10.0kb downstream 10000 false chr4: 30872510-30882509 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299493 5265 Fabidae View MSA
124060504 5270 Rosid View MSA
123749649 5271 Pentapetalae View MSA
122794973 5272 Eudicot View MSA
122043531 5273 Angiosperm View MSA
121344443 5274 Embryophyte View MSA
123428276 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 104.53     High  
cufflinks 95.178     High  
cufflinks 126.529     High  
cufflinks 119.948     High  
cufflinks 95.198     High  
cufflinks 31.339     High Low
cufflinks 124.205     High  
cufflinks 122.913     High  
cufflinks 197.15     High High

0 Strain