Gene : Medtr4g081130 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR10617:SF115 - THIAMINE THIAZOLE SYNTHASE Description:  thiazole biosynthetic enzyme
Genomic Order:  3933 Name:  ? Medtr4g081130
Secondary Identifier:  ? PAC:31111738
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g081130 0.5kb upstream 0.5kb upstream 3407 true chr4: 31406252-31409658 Medicago truncatula
Medtr4g081130 0.5kb upstream 0.5kb upstream 500 false chr4: 31409159-31409658 Medicago truncatula
Medtr4g081130 0.5kb downstream 0.5kb downstream 3407 true chr4: 31405752-31409158 Medicago truncatula
Medtr4g081130 0.5kb downstream 0.5kb downstream 500 false chr4: 31405752-31406251 Medicago truncatula
Medtr4g081130 1.0kb upstream 1.0kb upstream 3907 true chr4: 31406252-31410158 Medicago truncatula
Medtr4g081130 1.0kb upstream 1.0kb upstream 1000 false chr4: 31409159-31410158 Medicago truncatula
Medtr4g081130 1.0kb downstream 1.0kb downstream 3907 true chr4: 31405252-31409158 Medicago truncatula
Medtr4g081130 1.0kb downstream 1.0kb downstream 1000 false chr4: 31405252-31406251 Medicago truncatula
Medtr4g081130 2.0kb upstream 2.0kb upstream 4907 true chr4: 31406252-31411158 Medicago truncatula
Medtr4g081130 2.0kb upstream 2.0kb upstream 2000 false chr4: 31409159-31411158 Medicago truncatula
Medtr4g081130 2.0kb downstream 2.0kb downstream 4907 true chr4: 31404252-31409158 Medicago truncatula
Medtr4g081130 2.0kb downstream 2.0kb downstream 2000 false chr4: 31404252-31406251 Medicago truncatula
Medtr4g081130 5.0kb upstream 5.0kb upstream 7907 true chr4: 31406252-31414158 Medicago truncatula
Medtr4g081130 5.0kb upstream 5.0kb upstream 5000 false chr4: 31409159-31414158 Medicago truncatula
Medtr4g081130 5.0kb downstream 5.0kb downstream 7907 true chr4: 31401252-31409158 Medicago truncatula
Medtr4g081130 5.0kb downstream 5.0kb downstream 5000 false chr4: 31401252-31406251 Medicago truncatula
Medtr4g081130 10.0kb upstream 10.0kb upstream 12907 true chr4: 31406252-31419158 Medicago truncatula
Medtr4g081130 10.0kb upstream 10.0kb upstream 10000 false chr4: 31409159-31419158 Medicago truncatula
Medtr4g081130 10.0kb downstream 10.0kb downstream 12907 true chr4: 31396252-31409158 Medicago truncatula
Medtr4g081130 10.0kb downstream 10.0kb downstream 10000 false chr4: 31396252-31406251 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309348 5265 Fabidae View MSA
124071218 5270 Rosid View MSA
123744490 5271 Pentapetalae View MSA
122793615 5272 Eudicot View MSA
122045282 5273 Angiosperm View MSA
121346380 5274 Embryophyte View MSA
123423990 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 44.377     High High
cufflinks 9.016        
cufflinks 5.244       Low
cufflinks 30.71     High  
cufflinks 8.084        
cufflinks 20.652     High  
cufflinks 9.494        
cufflinks 6.01       Low
cufflinks 43.653     High High

0 Strain