Gene : Medtr4g081110 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR22957//PTHR22957:SF276 - TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN Description:  Ypt/Rab-GAP domain of gyp1p superfamily protein
Genomic Order:  3931 Name:  ? Medtr4g081110
Secondary Identifier:  ? PAC:31111042
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g081110 0.5kb upstream 0.5kb upstream 5104 true chr4: 31395990-31401093 Medicago truncatula
Medtr4g081110 0.5kb upstream 0.5kb upstream 500 false chr4: 31395990-31396489 Medicago truncatula
Medtr4g081110 0.5kb downstream 0.5kb downstream 5104 true chr4: 31396490-31401593 Medicago truncatula
Medtr4g081110 0.5kb downstream 0.5kb downstream 500 false chr4: 31401094-31401593 Medicago truncatula
Medtr4g081110 1.0kb upstream 1.0kb upstream 5604 true chr4: 31395490-31401093 Medicago truncatula
Medtr4g081110 1.0kb upstream 1.0kb upstream 1000 false chr4: 31395490-31396489 Medicago truncatula
Medtr4g081110 1.0kb downstream 1.0kb downstream 5604 true chr4: 31396490-31402093 Medicago truncatula
Medtr4g081110 1.0kb downstream 1.0kb downstream 1000 false chr4: 31401094-31402093 Medicago truncatula
Medtr4g081110 2.0kb upstream 2.0kb upstream 6604 true chr4: 31394490-31401093 Medicago truncatula
Medtr4g081110 2.0kb upstream 2.0kb upstream 2000 false chr4: 31394490-31396489 Medicago truncatula
Medtr4g081110 2.0kb downstream 2.0kb downstream 6604 true chr4: 31396490-31403093 Medicago truncatula
Medtr4g081110 2.0kb downstream 2.0kb downstream 2000 false chr4: 31401094-31403093 Medicago truncatula
Medtr4g081110 5.0kb upstream 5.0kb upstream 9604 true chr4: 31391490-31401093 Medicago truncatula
Medtr4g081110 5.0kb upstream 5.0kb upstream 5000 false chr4: 31391490-31396489 Medicago truncatula
Medtr4g081110 5.0kb downstream 5.0kb downstream 9604 true chr4: 31396490-31406093 Medicago truncatula
Medtr4g081110 5.0kb downstream 5.0kb downstream 5000 false chr4: 31401094-31406093 Medicago truncatula
Medtr4g081110 10.0kb upstream 10.0kb upstream 14604 true chr4: 31386490-31401093 Medicago truncatula
Medtr4g081110 10.0kb upstream 10.0kb upstream 10000 false chr4: 31386490-31396489 Medicago truncatula
Medtr4g081110 10.0kb downstream 10.0kb downstream 14604 true chr4: 31396490-31411093 Medicago truncatula
Medtr4g081110 10.0kb downstream 10.0kb downstream 10000 false chr4: 31401094-31411093 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314128 5265 Fabidae View MSA
124064798 5270 Rosid View MSA
123749746 5271 Pentapetalae View MSA
122789971 5272 Eudicot View MSA
122046428 5273 Angiosperm View MSA
121350403 5274 Embryophyte View MSA
123428253 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.341        
cufflinks 0.083        
cufflinks 0.189        
cufflinks 0.102        
cufflinks 0.082        
cufflinks 1.695       High
cufflinks 0.548        
cufflinks 0.13        
cufflinks 0.071     Low  

0 Strain