Gene : Medtr4g080340 M. truncatula Mt4.0v1
Defline:  (1 of 9) PF07939 - Protein of unknown function (DUF1685) (DUF1685) Description:  DUF1685 family protein
Genomic Order:  3893 Name:  ? Medtr4g080340
Secondary Identifier:  ? PAC:31114837
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g080340 0.5kb upstream 0.5kb upstream 1464 true chr4: 31165662-31167125 Medicago truncatula
Medtr4g080340 0.5kb upstream 0.5kb upstream 500 false chr4: 31165662-31166161 Medicago truncatula
Medtr4g080340 0.5kb downstream 0.5kb downstream 1464 true chr4: 31166162-31167625 Medicago truncatula
Medtr4g080340 0.5kb downstream 0.5kb downstream 500 false chr4: 31167126-31167625 Medicago truncatula
Medtr4g080340 1.0kb upstream 1.0kb upstream 1964 true chr4: 31165162-31167125 Medicago truncatula
Medtr4g080340 1.0kb upstream 1.0kb upstream 1000 false chr4: 31165162-31166161 Medicago truncatula
Medtr4g080340 1.0kb downstream 1.0kb downstream 1964 true chr4: 31166162-31168125 Medicago truncatula
Medtr4g080340 1.0kb downstream 1.0kb downstream 1000 false chr4: 31167126-31168125 Medicago truncatula
Medtr4g080340 2.0kb upstream 2.0kb upstream 2964 true chr4: 31164162-31167125 Medicago truncatula
Medtr4g080340 2.0kb upstream 2.0kb upstream 2000 false chr4: 31164162-31166161 Medicago truncatula
Medtr4g080340 2.0kb downstream 2.0kb downstream 2964 true chr4: 31166162-31169125 Medicago truncatula
Medtr4g080340 2.0kb downstream 2.0kb downstream 2000 false chr4: 31167126-31169125 Medicago truncatula
Medtr4g080340 5.0kb upstream 5.0kb upstream 5964 true chr4: 31161162-31167125 Medicago truncatula
Medtr4g080340 5.0kb upstream 5.0kb upstream 5000 false chr4: 31161162-31166161 Medicago truncatula
Medtr4g080340 5.0kb downstream 5.0kb downstream 5964 true chr4: 31166162-31172125 Medicago truncatula
Medtr4g080340 5.0kb downstream 5.0kb downstream 5000 false chr4: 31167126-31172125 Medicago truncatula
Medtr4g080340 10.0kb upstream 10.0kb upstream 10964 true chr4: 31156162-31167125 Medicago truncatula
Medtr4g080340 10.0kb upstream 10.0kb upstream 10000 false chr4: 31156162-31166161 Medicago truncatula
Medtr4g080340 10.0kb downstream 10.0kb downstream 10964 true chr4: 31166162-31177125 Medicago truncatula
Medtr4g080340 10.0kb downstream 10.0kb downstream 10000 false chr4: 31167126-31177125 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310767 5265 Fabidae View MSA
124069452 5270 Rosid View MSA
123750929 5271 Pentapetalae View MSA
122791685 5272 Eudicot View MSA
122049141 5273 Angiosperm View MSA
121350568 5274 Embryophyte View MSA
123381799 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 56.785     High High
cufflinks 18.551     High  
cufflinks 8.069        
cufflinks 4.841       Low
cufflinks 11.688     High  
cufflinks 20.42     High  
cufflinks 43.203     High High
cufflinks 11.391     High  
cufflinks 24.916     High  

0 Strain