Gene : Medtr4g069240 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR10830 - DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOSYLTRANSFERASE 48 KDA SUBUNIT Description:  oligosaccharyltransferase 48 kDa subunit beta
Genomic Order:  3148 Name:  ? Medtr4g069240
Secondary Identifier:  ? PAC:31110493
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS Medicago truncatula pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g069240 0.5kb upstream 0.5kb upstream 5629 true chr4: 26022692-26028320 Medicago truncatula
Medtr4g069240 0.5kb upstream 0.5kb upstream 500 false chr4: 26027821-26028320 Medicago truncatula
Medtr4g069240 0.5kb downstream 0.5kb downstream 5629 true chr4: 26022192-26027820 Medicago truncatula
Medtr4g069240 0.5kb downstream 0.5kb downstream 500 false chr4: 26022192-26022691 Medicago truncatula
Medtr4g069240 1.0kb upstream 1.0kb upstream 6129 true chr4: 26022692-26028820 Medicago truncatula
Medtr4g069240 1.0kb upstream 1.0kb upstream 1000 false chr4: 26027821-26028820 Medicago truncatula
Medtr4g069240 1.0kb downstream 1.0kb downstream 6129 true chr4: 26021692-26027820 Medicago truncatula
Medtr4g069240 1.0kb downstream 1.0kb downstream 1000 false chr4: 26021692-26022691 Medicago truncatula
Medtr4g069240 2.0kb upstream 2.0kb upstream 7129 true chr4: 26022692-26029820 Medicago truncatula
Medtr4g069240 2.0kb upstream 2.0kb upstream 2000 false chr4: 26027821-26029820 Medicago truncatula
Medtr4g069240 2.0kb downstream 2.0kb downstream 7129 true chr4: 26020692-26027820 Medicago truncatula
Medtr4g069240 2.0kb downstream 2.0kb downstream 2000 false chr4: 26020692-26022691 Medicago truncatula
Medtr4g069240 5.0kb upstream 5.0kb upstream 10129 true chr4: 26022692-26032820 Medicago truncatula
Medtr4g069240 5.0kb upstream 5.0kb upstream 5000 false chr4: 26027821-26032820 Medicago truncatula
Medtr4g069240 5.0kb downstream 5.0kb downstream 10129 true chr4: 26017692-26027820 Medicago truncatula
Medtr4g069240 5.0kb downstream 5.0kb downstream 5000 false chr4: 26017692-26022691 Medicago truncatula
Medtr4g069240 10.0kb upstream 10.0kb upstream 15129 true chr4: 26022692-26037820 Medicago truncatula
Medtr4g069240 10.0kb upstream 10.0kb upstream 10000 false chr4: 26027821-26037820 Medicago truncatula
Medtr4g069240 10.0kb downstream 10.0kb downstream 15129 true chr4: 26012692-26027820 Medicago truncatula
Medtr4g069240 10.0kb downstream 10.0kb downstream 10000 false chr4: 26012692-26022691 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300131 5265 Fabidae View MSA
124068275 5270 Rosid View MSA
123750728 5271 Pentapetalae View MSA
122793398 5272 Eudicot View MSA
122043093 5273 Angiosperm View MSA
121346216 5274 Embryophyte View MSA
123424757 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.091        
cufflinks 9.032        
cufflinks 5.252       Low
cufflinks 8.857        
cufflinks 8.688        
cufflinks 4.676       Low
cufflinks 6.383        
cufflinks 5.362        
cufflinks 11.247     High High

0 Strain