Gene : Medtr4g072090 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR13690:SF76 - BASIC-LEUCINE ZIPPER (BZIP) TRANSCRIPTION FACTOR FAMILY PROTEIN Description:  BZIP transcription factor
Genomic Order:  3330 Name:  ? Medtr4g072090
Secondary Identifier:  ? PAC:31109176
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g072090 0.5kb upstream 0.5kb upstream 4539 true chr4: 27347972-27352510 Medicago truncatula
Medtr4g072090 0.5kb upstream 0.5kb upstream 500 false chr4: 27347972-27348471 Medicago truncatula
Medtr4g072090 0.5kb downstream 0.5kb downstream 4539 true chr4: 27348472-27353010 Medicago truncatula
Medtr4g072090 0.5kb downstream 0.5kb downstream 500 false chr4: 27352511-27353010 Medicago truncatula
Medtr4g072090 1.0kb upstream 1.0kb upstream 5039 true chr4: 27347472-27352510 Medicago truncatula
Medtr4g072090 1.0kb upstream 1.0kb upstream 1000 false chr4: 27347472-27348471 Medicago truncatula
Medtr4g072090 1.0kb downstream 1.0kb downstream 5039 true chr4: 27348472-27353510 Medicago truncatula
Medtr4g072090 1.0kb downstream 1.0kb downstream 1000 false chr4: 27352511-27353510 Medicago truncatula
Medtr4g072090 2.0kb upstream 2.0kb upstream 6039 true chr4: 27346472-27352510 Medicago truncatula
Medtr4g072090 2.0kb upstream 2.0kb upstream 2000 false chr4: 27346472-27348471 Medicago truncatula
Medtr4g072090 2.0kb downstream 2.0kb downstream 6039 true chr4: 27348472-27354510 Medicago truncatula
Medtr4g072090 2.0kb downstream 2.0kb downstream 2000 false chr4: 27352511-27354510 Medicago truncatula
Medtr4g072090 5.0kb upstream 5.0kb upstream 9039 true chr4: 27343472-27352510 Medicago truncatula
Medtr4g072090 5.0kb upstream 5.0kb upstream 5000 false chr4: 27343472-27348471 Medicago truncatula
Medtr4g072090 5.0kb downstream 5.0kb downstream 9039 true chr4: 27348472-27357510 Medicago truncatula
Medtr4g072090 5.0kb downstream 5.0kb downstream 5000 false chr4: 27352511-27357510 Medicago truncatula
Medtr4g072090 10.0kb upstream 10.0kb upstream 14039 true chr4: 27338472-27352510 Medicago truncatula
Medtr4g072090 10.0kb upstream 10.0kb upstream 10000 false chr4: 27338472-27348471 Medicago truncatula
Medtr4g072090 10.0kb downstream 10.0kb downstream 14039 true chr4: 27348472-27362510 Medicago truncatula
Medtr4g072090 10.0kb downstream 10.0kb downstream 10000 false chr4: 27352511-27362510 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305737 5265 Fabidae View MSA
124066313 5270 Rosid View MSA
123743567 5271 Pentapetalae View MSA
122796613 5272 Eudicot View MSA
122046489 5273 Angiosperm View MSA
123428913 5275 Viridiplantae View MSA
121310613 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.836        
cufflinks 5.676        
cufflinks 6.889        
cufflinks 1.1       Low
cufflinks 5.248        
cufflinks 1.228       Low
cufflinks 4.112        
cufflinks 4.987        
cufflinks 5.533        

0 Strain