Gene : Medtr4g073400 M. truncatula Mt4.0v1
Defline:  (1 of 4) PTHR10774:SF50 - SYNAPTOTAGMIN-1-RELATED Description:  calcium-dependent lipid-binding (CaLB domain) family protein
Genomic Order:  3433 Name:  ? Medtr4g073400
Secondary Identifier:  ? PAC:31110767
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g073400 0.5kb upstream 0.5kb upstream 8428 true chr4: 27790890-27799317 Medicago truncatula
Medtr4g073400 0.5kb upstream 0.5kb upstream 500 false chr4: 27790890-27791389 Medicago truncatula
Medtr4g073400 0.5kb downstream 0.5kb downstream 8428 true chr4: 27791390-27799817 Medicago truncatula
Medtr4g073400 0.5kb downstream 0.5kb downstream 500 false chr4: 27799318-27799817 Medicago truncatula
Medtr4g073400 1.0kb upstream 1.0kb upstream 8928 true chr4: 27790390-27799317 Medicago truncatula
Medtr4g073400 1.0kb upstream 1.0kb upstream 1000 false chr4: 27790390-27791389 Medicago truncatula
Medtr4g073400 1.0kb downstream 1.0kb downstream 8928 true chr4: 27791390-27800317 Medicago truncatula
Medtr4g073400 1.0kb downstream 1.0kb downstream 1000 false chr4: 27799318-27800317 Medicago truncatula
Medtr4g073400 2.0kb upstream 2.0kb upstream 9928 true chr4: 27789390-27799317 Medicago truncatula
Medtr4g073400 2.0kb upstream 2.0kb upstream 2000 false chr4: 27789390-27791389 Medicago truncatula
Medtr4g073400 2.0kb downstream 2.0kb downstream 9928 true chr4: 27791390-27801317 Medicago truncatula
Medtr4g073400 2.0kb downstream 2.0kb downstream 2000 false chr4: 27799318-27801317 Medicago truncatula
Medtr4g073400 5.0kb upstream 5.0kb upstream 12928 true chr4: 27786390-27799317 Medicago truncatula
Medtr4g073400 5.0kb upstream 5.0kb upstream 5000 false chr4: 27786390-27791389 Medicago truncatula
Medtr4g073400 5.0kb downstream 5.0kb downstream 12928 true chr4: 27791390-27804317 Medicago truncatula
Medtr4g073400 5.0kb downstream 5.0kb downstream 5000 false chr4: 27799318-27804317 Medicago truncatula
Medtr4g073400 10.0kb upstream 10.0kb upstream 17928 true chr4: 27781390-27799317 Medicago truncatula
Medtr4g073400 10.0kb upstream 10.0kb upstream 10000 false chr4: 27781390-27791389 Medicago truncatula
Medtr4g073400 10.0kb downstream 10.0kb downstream 17928 true chr4: 27791390-27809317 Medicago truncatula
Medtr4g073400 10.0kb downstream 10.0kb downstream 10000 false chr4: 27799318-27809317 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299475 5265 Fabidae View MSA
124069636 5270 Rosid View MSA
123744925 5271 Pentapetalae View MSA
122791810 5272 Eudicot View MSA
122043926 5273 Angiosperm View MSA
123429031 5275 Viridiplantae View MSA
121346982 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.362        
cufflinks 9.324        
cufflinks 10.365     High  
cufflinks 6.481        
cufflinks 11.254     High  
cufflinks 4.453       Low
cufflinks 9.523        
cufflinks 9.351     High  
cufflinks 11.986     High High

0 Strain