Gene : Medtr4g073520 M. truncatula Mt4.0v1
Defline:  (1 of 5) PTHR22950:SF205 - AMINO ACID PERMEASE 3-RELATED Description:  transmembrane amino acid transporter family protein
Genomic Order:  3440 Name:  ? Medtr4g073520
Secondary Identifier:  ? PAC:31107584
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g073520 0.5kb upstream 0.5kb upstream 3462 true chr4: 27873615-27877076 Medicago truncatula
Medtr4g073520 0.5kb upstream 0.5kb upstream 500 false chr4: 27873615-27874114 Medicago truncatula
Medtr4g073520 0.5kb downstream 0.5kb downstream 3462 true chr4: 27874115-27877576 Medicago truncatula
Medtr4g073520 0.5kb downstream 0.5kb downstream 500 false chr4: 27877077-27877576 Medicago truncatula
Medtr4g073520 1.0kb upstream 1.0kb upstream 3962 true chr4: 27873115-27877076 Medicago truncatula
Medtr4g073520 1.0kb upstream 1.0kb upstream 1000 false chr4: 27873115-27874114 Medicago truncatula
Medtr4g073520 1.0kb downstream 1.0kb downstream 3962 true chr4: 27874115-27878076 Medicago truncatula
Medtr4g073520 1.0kb downstream 1.0kb downstream 1000 false chr4: 27877077-27878076 Medicago truncatula
Medtr4g073520 2.0kb upstream 2.0kb upstream 4962 true chr4: 27872115-27877076 Medicago truncatula
Medtr4g073520 2.0kb upstream 2.0kb upstream 2000 false chr4: 27872115-27874114 Medicago truncatula
Medtr4g073520 2.0kb downstream 2.0kb downstream 4962 true chr4: 27874115-27879076 Medicago truncatula
Medtr4g073520 2.0kb downstream 2.0kb downstream 2000 false chr4: 27877077-27879076 Medicago truncatula
Medtr4g073520 5.0kb upstream 5.0kb upstream 7962 true chr4: 27869115-27877076 Medicago truncatula
Medtr4g073520 5.0kb upstream 5.0kb upstream 5000 false chr4: 27869115-27874114 Medicago truncatula
Medtr4g073520 5.0kb downstream 5.0kb downstream 7962 true chr4: 27874115-27882076 Medicago truncatula
Medtr4g073520 5.0kb downstream 5.0kb downstream 5000 false chr4: 27877077-27882076 Medicago truncatula
Medtr4g073520 10.0kb upstream 10.0kb upstream 12962 true chr4: 27864115-27877076 Medicago truncatula
Medtr4g073520 10.0kb upstream 10.0kb upstream 10000 false chr4: 27864115-27874114 Medicago truncatula
Medtr4g073520 10.0kb downstream 10.0kb downstream 12962 true chr4: 27874115-27887076 Medicago truncatula
Medtr4g073520 10.0kb downstream 10.0kb downstream 10000 false chr4: 27877077-27887076 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310371 5265 Fabidae View MSA
124070773 5270 Rosid View MSA
123747196 5271 Pentapetalae View MSA
122795711 5272 Eudicot View MSA
122048359 5273 Angiosperm View MSA
121351118 5274 Embryophyte View MSA
123426213 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.004     Low Low
cufflinks 0.825        
cufflinks 0.503        
cufflinks 0.017     Low  
cufflinks 0.938        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.023     Low  
cufflinks 0.81        
cufflinks 0.065     Low  

0 Strain