Gene : Medtr4g077880 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR23075:SF0 - ATPASE FAMILY AAA DOMAIN-CONTAINING PROTEIN 3 Description:  P-loop nucleoside triphosphate hydrolase superfamily protein
Genomic Order:  3715 Name:  ? Medtr4g077880
Secondary Identifier:  ? PAC:31108258
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g077880 0.5kb upstream 0.5kb upstream 5318 true chr4: 29900220-29905537 Medicago truncatula
Medtr4g077880 0.5kb upstream 0.5kb upstream 500 false chr4: 29905038-29905537 Medicago truncatula
Medtr4g077880 0.5kb downstream 0.5kb downstream 5318 true chr4: 29899720-29905037 Medicago truncatula
Medtr4g077880 0.5kb downstream 0.5kb downstream 500 false chr4: 29899720-29900219 Medicago truncatula
Medtr4g077880 1.0kb upstream 1.0kb upstream 5818 true chr4: 29900220-29906037 Medicago truncatula
Medtr4g077880 1.0kb upstream 1.0kb upstream 1000 false chr4: 29905038-29906037 Medicago truncatula
Medtr4g077880 1.0kb downstream 1.0kb downstream 5818 true chr4: 29899220-29905037 Medicago truncatula
Medtr4g077880 1.0kb downstream 1.0kb downstream 1000 false chr4: 29899220-29900219 Medicago truncatula
Medtr4g077880 2.0kb upstream 2.0kb upstream 6818 true chr4: 29900220-29907037 Medicago truncatula
Medtr4g077880 2.0kb upstream 2.0kb upstream 2000 false chr4: 29905038-29907037 Medicago truncatula
Medtr4g077880 2.0kb downstream 2.0kb downstream 6818 true chr4: 29898220-29905037 Medicago truncatula
Medtr4g077880 2.0kb downstream 2.0kb downstream 2000 false chr4: 29898220-29900219 Medicago truncatula
Medtr4g077880 5.0kb upstream 5.0kb upstream 9818 true chr4: 29900220-29910037 Medicago truncatula
Medtr4g077880 5.0kb upstream 5.0kb upstream 5000 false chr4: 29905038-29910037 Medicago truncatula
Medtr4g077880 5.0kb downstream 5.0kb downstream 9818 true chr4: 29895220-29905037 Medicago truncatula
Medtr4g077880 5.0kb downstream 5.0kb downstream 5000 false chr4: 29895220-29900219 Medicago truncatula
Medtr4g077880 10.0kb upstream 10.0kb upstream 14818 true chr4: 29900220-29915037 Medicago truncatula
Medtr4g077880 10.0kb upstream 10.0kb upstream 10000 false chr4: 29905038-29915037 Medicago truncatula
Medtr4g077880 10.0kb downstream 10.0kb downstream 14818 true chr4: 29890220-29905037 Medicago truncatula
Medtr4g077880 10.0kb downstream 10.0kb downstream 10000 false chr4: 29890220-29900219 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306849 5265 Fabidae View MSA
124062064 5270 Rosid View MSA
123743451 5271 Pentapetalae View MSA
122787141 5272 Eudicot View MSA
122051121 5273 Angiosperm View MSA
121347220 5274 Embryophyte View MSA
123424543 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.776        
cufflinks 0.978        
cufflinks 1.082        
cufflinks 0.259       Low
cufflinks 1.733       High
cufflinks 0.257       Low
cufflinks 0.656        
cufflinks 1.216        
cufflinks 0.962        

0 Strain