Gene : Medtr4g073100 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR23334 - CCAAT/ENHANCER BINDING PROTEIN Description:  BZIP transcription factor
Genomic Order:  3419 Name:  ? Medtr4g073100
Secondary Identifier:  ? PAC:31112486
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g073100 0.5kb upstream 0.5kb upstream 3482 true chr4: 27647459-27650940 Medicago truncatula
Medtr4g073100 0.5kb upstream 0.5kb upstream 500 false chr4: 27650441-27650940 Medicago truncatula
Medtr4g073100 0.5kb downstream 0.5kb downstream 3482 true chr4: 27646959-27650440 Medicago truncatula
Medtr4g073100 0.5kb downstream 0.5kb downstream 500 false chr4: 27646959-27647458 Medicago truncatula
Medtr4g073100 1.0kb upstream 1.0kb upstream 3982 true chr4: 27647459-27651440 Medicago truncatula
Medtr4g073100 1.0kb upstream 1.0kb upstream 1000 false chr4: 27650441-27651440 Medicago truncatula
Medtr4g073100 1.0kb downstream 1.0kb downstream 3982 true chr4: 27646459-27650440 Medicago truncatula
Medtr4g073100 1.0kb downstream 1.0kb downstream 1000 false chr4: 27646459-27647458 Medicago truncatula
Medtr4g073100 2.0kb upstream 2.0kb upstream 4982 true chr4: 27647459-27652440 Medicago truncatula
Medtr4g073100 2.0kb upstream 2.0kb upstream 2000 false chr4: 27650441-27652440 Medicago truncatula
Medtr4g073100 2.0kb downstream 2.0kb downstream 4982 true chr4: 27645459-27650440 Medicago truncatula
Medtr4g073100 2.0kb downstream 2.0kb downstream 2000 false chr4: 27645459-27647458 Medicago truncatula
Medtr4g073100 5.0kb upstream 5.0kb upstream 7982 true chr4: 27647459-27655440 Medicago truncatula
Medtr4g073100 5.0kb upstream 5.0kb upstream 5000 false chr4: 27650441-27655440 Medicago truncatula
Medtr4g073100 5.0kb downstream 5.0kb downstream 7982 true chr4: 27642459-27650440 Medicago truncatula
Medtr4g073100 5.0kb downstream 5.0kb downstream 5000 false chr4: 27642459-27647458 Medicago truncatula
Medtr4g073100 10.0kb upstream 10.0kb upstream 12982 true chr4: 27647459-27660440 Medicago truncatula
Medtr4g073100 10.0kb upstream 10.0kb upstream 10000 false chr4: 27650441-27660440 Medicago truncatula
Medtr4g073100 10.0kb downstream 10.0kb downstream 12982 true chr4: 27637459-27650440 Medicago truncatula
Medtr4g073100 10.0kb downstream 10.0kb downstream 10000 false chr4: 27637459-27647458 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307869 5265 Fabidae View MSA
124062533 5270 Rosid View MSA
123737163 5271 Pentapetalae View MSA
122793272 5272 Eudicot View MSA
122047570 5273 Angiosperm View MSA
121349674 5274 Embryophyte View MSA
123381395 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.422       Low
cufflinks 8.714        
cufflinks 9.84        
cufflinks 42.929     High High
cufflinks 10.094        
cufflinks 11.086     High  
cufflinks 14.596     High  
cufflinks 9.445     High  
cufflinks 26.259     High High

0 Strain