Gene : Medtr4g073890 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR10285:SF76 - URIDINE KINASE Description:  phosphoribulokinase/uridine kinase-like protein
Genomic Order:  3462 Name:  ? Medtr4g073890
Secondary Identifier:  ? PAC:31109419
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2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-7193 Medicago truncatula pathologic  
Mtruncatula PWY-7196 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g073890 0.5kb upstream 0.5kb upstream 9494 true chr4: 28070640-28080133 Medicago truncatula
Medtr4g073890 0.5kb upstream 0.5kb upstream 500 false chr4: 28070640-28071139 Medicago truncatula
Medtr4g073890 0.5kb downstream 0.5kb downstream 9494 true chr4: 28071140-28080633 Medicago truncatula
Medtr4g073890 0.5kb downstream 0.5kb downstream 500 false chr4: 28080134-28080633 Medicago truncatula
Medtr4g073890 1.0kb upstream 1.0kb upstream 9994 true chr4: 28070140-28080133 Medicago truncatula
Medtr4g073890 1.0kb upstream 1.0kb upstream 1000 false chr4: 28070140-28071139 Medicago truncatula
Medtr4g073890 1.0kb downstream 1.0kb downstream 9994 true chr4: 28071140-28081133 Medicago truncatula
Medtr4g073890 1.0kb downstream 1.0kb downstream 1000 false chr4: 28080134-28081133 Medicago truncatula
Medtr4g073890 2.0kb upstream 2.0kb upstream 10994 true chr4: 28069140-28080133 Medicago truncatula
Medtr4g073890 2.0kb upstream 2.0kb upstream 2000 false chr4: 28069140-28071139 Medicago truncatula
Medtr4g073890 2.0kb downstream 2.0kb downstream 10994 true chr4: 28071140-28082133 Medicago truncatula
Medtr4g073890 2.0kb downstream 2.0kb downstream 2000 false chr4: 28080134-28082133 Medicago truncatula
Medtr4g073890 5.0kb upstream 5.0kb upstream 13994 true chr4: 28066140-28080133 Medicago truncatula
Medtr4g073890 5.0kb upstream 5.0kb upstream 5000 false chr4: 28066140-28071139 Medicago truncatula
Medtr4g073890 5.0kb downstream 5.0kb downstream 13994 true chr4: 28071140-28085133 Medicago truncatula
Medtr4g073890 5.0kb downstream 5.0kb downstream 5000 false chr4: 28080134-28085133 Medicago truncatula
Medtr4g073890 10.0kb upstream 10.0kb upstream 18994 true chr4: 28061140-28080133 Medicago truncatula
Medtr4g073890 10.0kb upstream 10.0kb upstream 10000 false chr4: 28061140-28071139 Medicago truncatula
Medtr4g073890 10.0kb downstream 10.0kb downstream 18994 true chr4: 28071140-28090133 Medicago truncatula
Medtr4g073890 10.0kb downstream 10.0kb downstream 10000 false chr4: 28080134-28090133 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306120 5265 Fabidae View MSA
124070976 5270 Rosid View MSA
123746405 5271 Pentapetalae View MSA
122786866 5272 Eudicot View MSA
122043584 5273 Angiosperm View MSA
121351427 5274 Embryophyte View MSA
123427517 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.147        
cufflinks 1.029        
cufflinks 1.195        
cufflinks 0.408       Low
cufflinks 1.376       High
cufflinks 0.452       Low
cufflinks 0.796        
cufflinks 0.962        
cufflinks 0.612        

0 Strain