Gene : Medtr4g075280 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR12649:SF11 - PEPTIDYL-TRNA HYDROLASE 2, MITOCHONDRIAL Description:  peptidyl-tRNA hydrolase II (PTH2) family protein
Genomic Order:  3555 Name:  ? Medtr4g075280
Secondary Identifier:  ? PAC:31107749
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g075280 0.5kb upstream 0.5kb upstream 4633 true chr4: 28746516-28751148 Medicago truncatula
Medtr4g075280 0.5kb upstream 0.5kb upstream 500 false chr4: 28750649-28751148 Medicago truncatula
Medtr4g075280 0.5kb downstream 0.5kb downstream 4633 true chr4: 28746016-28750648 Medicago truncatula
Medtr4g075280 0.5kb downstream 0.5kb downstream 500 false chr4: 28746016-28746515 Medicago truncatula
Medtr4g075280 1.0kb upstream 1.0kb upstream 5133 true chr4: 28746516-28751648 Medicago truncatula
Medtr4g075280 1.0kb upstream 1.0kb upstream 1000 false chr4: 28750649-28751648 Medicago truncatula
Medtr4g075280 1.0kb downstream 1.0kb downstream 5133 true chr4: 28745516-28750648 Medicago truncatula
Medtr4g075280 1.0kb downstream 1.0kb downstream 1000 false chr4: 28745516-28746515 Medicago truncatula
Medtr4g075280 2.0kb upstream 2.0kb upstream 6133 true chr4: 28746516-28752648 Medicago truncatula
Medtr4g075280 2.0kb upstream 2.0kb upstream 2000 false chr4: 28750649-28752648 Medicago truncatula
Medtr4g075280 2.0kb downstream 2.0kb downstream 6133 true chr4: 28744516-28750648 Medicago truncatula
Medtr4g075280 2.0kb downstream 2.0kb downstream 2000 false chr4: 28744516-28746515 Medicago truncatula
Medtr4g075280 5.0kb upstream 5.0kb upstream 9133 true chr4: 28746516-28755648 Medicago truncatula
Medtr4g075280 5.0kb upstream 5.0kb upstream 5000 false chr4: 28750649-28755648 Medicago truncatula
Medtr4g075280 5.0kb downstream 5.0kb downstream 9133 true chr4: 28741516-28750648 Medicago truncatula
Medtr4g075280 5.0kb downstream 5.0kb downstream 5000 false chr4: 28741516-28746515 Medicago truncatula
Medtr4g075280 10.0kb upstream 10.0kb upstream 14133 true chr4: 28746516-28760648 Medicago truncatula
Medtr4g075280 10.0kb upstream 10.0kb upstream 10000 false chr4: 28750649-28760648 Medicago truncatula
Medtr4g075280 10.0kb downstream 10.0kb downstream 14133 true chr4: 28736516-28750648 Medicago truncatula
Medtr4g075280 10.0kb downstream 10.0kb downstream 10000 false chr4: 28736516-28746515 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041458 5273 Angiosperm View MSA
122302769 5265 Fabidae View MSA
124065431 5270 Rosid View MSA
123745404 5271 Pentapetalae View MSA
122792467 5272 Eudicot View MSA
121347943 5274 Embryophyte View MSA
123426949 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.727       Low
cufflinks 2.09        
cufflinks 2.555        
cufflinks 2.052        
cufflinks 2.505        
cufflinks 2.531        
cufflinks 2.745       High
cufflinks 1.992        
cufflinks 2.071        

0 Strain