Gene : Medtr4g076200 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR24067//PTHR24067:SF121 - UBIQUITIN-CONJUGATING ENZYME E2 Description:  ubiquitin-conjugating enzyme E2
Genomic Order:  3607 Name:  ? Medtr4g076200
Secondary Identifier:  ? PAC:31112241
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-7511 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g076200 0.5kb upstream 0.5kb upstream 2737 true chr4: 29175713-29178449 Medicago truncatula
Medtr4g076200 0.5kb upstream 0.5kb upstream 500 false chr4: 29175713-29176212 Medicago truncatula
Medtr4g076200 0.5kb downstream 0.5kb downstream 2737 true chr4: 29176213-29178949 Medicago truncatula
Medtr4g076200 0.5kb downstream 0.5kb downstream 500 false chr4: 29178450-29178949 Medicago truncatula
Medtr4g076200 1.0kb upstream 1.0kb upstream 3237 true chr4: 29175213-29178449 Medicago truncatula
Medtr4g076200 1.0kb upstream 1.0kb upstream 1000 false chr4: 29175213-29176212 Medicago truncatula
Medtr4g076200 1.0kb downstream 1.0kb downstream 3237 true chr4: 29176213-29179449 Medicago truncatula
Medtr4g076200 1.0kb downstream 1.0kb downstream 1000 false chr4: 29178450-29179449 Medicago truncatula
Medtr4g076200 2.0kb upstream 2.0kb upstream 4237 true chr4: 29174213-29178449 Medicago truncatula
Medtr4g076200 2.0kb upstream 2.0kb upstream 2000 false chr4: 29174213-29176212 Medicago truncatula
Medtr4g076200 2.0kb downstream 2.0kb downstream 4237 true chr4: 29176213-29180449 Medicago truncatula
Medtr4g076200 2.0kb downstream 2.0kb downstream 2000 false chr4: 29178450-29180449 Medicago truncatula
Medtr4g076200 5.0kb upstream 5.0kb upstream 7237 true chr4: 29171213-29178449 Medicago truncatula
Medtr4g076200 5.0kb upstream 5.0kb upstream 5000 false chr4: 29171213-29176212 Medicago truncatula
Medtr4g076200 5.0kb downstream 5.0kb downstream 7237 true chr4: 29176213-29183449 Medicago truncatula
Medtr4g076200 5.0kb downstream 5.0kb downstream 5000 false chr4: 29178450-29183449 Medicago truncatula
Medtr4g076200 10.0kb upstream 10.0kb upstream 12237 true chr4: 29166213-29178449 Medicago truncatula
Medtr4g076200 10.0kb upstream 10.0kb upstream 10000 false chr4: 29166213-29176212 Medicago truncatula
Medtr4g076200 10.0kb downstream 10.0kb downstream 12237 true chr4: 29176213-29188449 Medicago truncatula
Medtr4g076200 10.0kb downstream 10.0kb downstream 10000 false chr4: 29178450-29188449 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310940 5265 Fabidae View MSA
124064944 5270 Rosid View MSA
123741729 5271 Pentapetalae View MSA
122792532 5272 Eudicot View MSA
122046674 5273 Angiosperm View MSA
121349130 5274 Embryophyte View MSA
123424862 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.068       Low
cufflinks 0.202        
cufflinks 0.25        
cufflinks 0.464        
cufflinks 0.168        
cufflinks 0.649        
cufflinks 1.478       High
cufflinks 0.245        
cufflinks 1.838       High

0 Strain