Gene : Medtr4g076850 M. truncatula Mt4.0v1
Defline:  (1 of 2) 6.1.1.5 - Isoleucine--tRNA ligase / Isoleucyl-tRNA synthetase Description:  isoleucine-tRNA ligase
Genomic Order:  3641 Name:  ? Medtr4g076850
Secondary Identifier:  ? PAC:31108619
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula TRNA-CHARGING-PWY Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g076850 0.5kb upstream 0.5kb upstream 18327 true chr4: 29386951-29405277 Medicago truncatula
Medtr4g076850 0.5kb upstream 0.5kb upstream 500 false chr4: 29386951-29387450 Medicago truncatula
Medtr4g076850 0.5kb downstream 0.5kb downstream 18327 true chr4: 29387451-29405777 Medicago truncatula
Medtr4g076850 0.5kb downstream 0.5kb downstream 500 false chr4: 29405278-29405777 Medicago truncatula
Medtr4g076850 1.0kb upstream 1.0kb upstream 18827 true chr4: 29386451-29405277 Medicago truncatula
Medtr4g076850 1.0kb upstream 1.0kb upstream 1000 false chr4: 29386451-29387450 Medicago truncatula
Medtr4g076850 1.0kb downstream 1.0kb downstream 18827 true chr4: 29387451-29406277 Medicago truncatula
Medtr4g076850 1.0kb downstream 1.0kb downstream 1000 false chr4: 29405278-29406277 Medicago truncatula
Medtr4g076850 2.0kb upstream 2.0kb upstream 19827 true chr4: 29385451-29405277 Medicago truncatula
Medtr4g076850 2.0kb upstream 2.0kb upstream 2000 false chr4: 29385451-29387450 Medicago truncatula
Medtr4g076850 2.0kb downstream 2.0kb downstream 19827 true chr4: 29387451-29407277 Medicago truncatula
Medtr4g076850 2.0kb downstream 2.0kb downstream 2000 false chr4: 29405278-29407277 Medicago truncatula
Medtr4g076850 5.0kb upstream 5.0kb upstream 22827 true chr4: 29382451-29405277 Medicago truncatula
Medtr4g076850 5.0kb upstream 5.0kb upstream 5000 false chr4: 29382451-29387450 Medicago truncatula
Medtr4g076850 5.0kb downstream 5.0kb downstream 22827 true chr4: 29387451-29410277 Medicago truncatula
Medtr4g076850 5.0kb downstream 5.0kb downstream 5000 false chr4: 29405278-29410277 Medicago truncatula
Medtr4g076850 10.0kb upstream 10.0kb upstream 27827 true chr4: 29377451-29405277 Medicago truncatula
Medtr4g076850 10.0kb upstream 10.0kb upstream 10000 false chr4: 29377451-29387450 Medicago truncatula
Medtr4g076850 10.0kb downstream 10.0kb downstream 27827 true chr4: 29387451-29415277 Medicago truncatula
Medtr4g076850 10.0kb downstream 10.0kb downstream 10000 false chr4: 29405278-29415277 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041086 5273 Angiosperm View MSA
122307524 5265 Fabidae View MSA
124063415 5270 Rosid View MSA
123737064 5271 Pentapetalae View MSA
122787980 5272 Eudicot View MSA
121346625 5274 Embryophyte View MSA
123428554 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.46        
cufflinks 3.872        
cufflinks 3.344        
cufflinks 1.337        
cufflinks 7.323       High
cufflinks 0.66       Low
cufflinks 2.578        
cufflinks 3.231        
cufflinks 3.118        

0 Strain