Gene : Medtr4g076870 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR22976 - BIOTIN SYNTHASE Description:  biotin synthase
Genomic Order:  3642 Name:  ? Medtr4g076870
Secondary Identifier:  ? PAC:31115395
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY0-1507 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g076870 0.5kb upstream 0.5kb upstream 6109 true chr4: 29406690-29412798 Medicago truncatula
Medtr4g076870 0.5kb upstream 0.5kb upstream 500 false chr4: 29412299-29412798 Medicago truncatula
Medtr4g076870 0.5kb downstream 0.5kb downstream 6109 true chr4: 29406190-29412298 Medicago truncatula
Medtr4g076870 0.5kb downstream 0.5kb downstream 500 false chr4: 29406190-29406689 Medicago truncatula
Medtr4g076870 1.0kb upstream 1.0kb upstream 6609 true chr4: 29406690-29413298 Medicago truncatula
Medtr4g076870 1.0kb upstream 1.0kb upstream 1000 false chr4: 29412299-29413298 Medicago truncatula
Medtr4g076870 1.0kb downstream 1.0kb downstream 6609 true chr4: 29405690-29412298 Medicago truncatula
Medtr4g076870 1.0kb downstream 1.0kb downstream 1000 false chr4: 29405690-29406689 Medicago truncatula
Medtr4g076870 2.0kb upstream 2.0kb upstream 7609 true chr4: 29406690-29414298 Medicago truncatula
Medtr4g076870 2.0kb upstream 2.0kb upstream 2000 false chr4: 29412299-29414298 Medicago truncatula
Medtr4g076870 2.0kb downstream 2.0kb downstream 7609 true chr4: 29404690-29412298 Medicago truncatula
Medtr4g076870 2.0kb downstream 2.0kb downstream 2000 false chr4: 29404690-29406689 Medicago truncatula
Medtr4g076870 5.0kb upstream 5.0kb upstream 10609 true chr4: 29406690-29417298 Medicago truncatula
Medtr4g076870 5.0kb upstream 5.0kb upstream 5000 false chr4: 29412299-29417298 Medicago truncatula
Medtr4g076870 5.0kb downstream 5.0kb downstream 10609 true chr4: 29401690-29412298 Medicago truncatula
Medtr4g076870 5.0kb downstream 5.0kb downstream 5000 false chr4: 29401690-29406689 Medicago truncatula
Medtr4g076870 10.0kb upstream 10.0kb upstream 15609 true chr4: 29406690-29422298 Medicago truncatula
Medtr4g076870 10.0kb upstream 10.0kb upstream 10000 false chr4: 29412299-29422298 Medicago truncatula
Medtr4g076870 10.0kb downstream 10.0kb downstream 15609 true chr4: 29396690-29412298 Medicago truncatula
Medtr4g076870 10.0kb downstream 10.0kb downstream 10000 false chr4: 29396690-29406689 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308506 5265 Fabidae View MSA
124069050 5270 Rosid View MSA
123738436 5271 Pentapetalae View MSA
122791352 5272 Eudicot View MSA
122044097 5273 Angiosperm View MSA
121346101 5274 Embryophyte View MSA
123424620 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.193     High High
cufflinks 4.521        
cufflinks 3.75        
cufflinks 6.426        
cufflinks 6.407        
cufflinks 1.972       Low
cufflinks 6.872        
cufflinks 4.267        
cufflinks 7.776        

0 Strain