Gene : Medtr4g077760 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR31636:SF65 - SCARECROW-LIKE PROTEIN 4-RELATED Description:  GRAS family transcription factor
Genomic Order:  3705 Name:  ? Medtr4g077760
Secondary Identifier:  ? PAC:31112609
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g077760 0.5kb upstream 0.5kb upstream 3027 true chr4: 29811772-29814798 Medicago truncatula
Medtr4g077760 0.5kb upstream 0.5kb upstream 500 false chr4: 29814299-29814798 Medicago truncatula
Medtr4g077760 0.5kb downstream 0.5kb downstream 3027 true chr4: 29811272-29814298 Medicago truncatula
Medtr4g077760 0.5kb downstream 0.5kb downstream 500 false chr4: 29811272-29811771 Medicago truncatula
Medtr4g077760 1.0kb upstream 1.0kb upstream 3527 true chr4: 29811772-29815298 Medicago truncatula
Medtr4g077760 1.0kb upstream 1.0kb upstream 1000 false chr4: 29814299-29815298 Medicago truncatula
Medtr4g077760 1.0kb downstream 1.0kb downstream 3527 true chr4: 29810772-29814298 Medicago truncatula
Medtr4g077760 1.0kb downstream 1.0kb downstream 1000 false chr4: 29810772-29811771 Medicago truncatula
Medtr4g077760 2.0kb upstream 2.0kb upstream 4527 true chr4: 29811772-29816298 Medicago truncatula
Medtr4g077760 2.0kb upstream 2.0kb upstream 2000 false chr4: 29814299-29816298 Medicago truncatula
Medtr4g077760 2.0kb downstream 2.0kb downstream 4527 true chr4: 29809772-29814298 Medicago truncatula
Medtr4g077760 2.0kb downstream 2.0kb downstream 2000 false chr4: 29809772-29811771 Medicago truncatula
Medtr4g077760 5.0kb upstream 5.0kb upstream 7527 true chr4: 29811772-29819298 Medicago truncatula
Medtr4g077760 5.0kb upstream 5.0kb upstream 5000 false chr4: 29814299-29819298 Medicago truncatula
Medtr4g077760 5.0kb downstream 5.0kb downstream 7527 true chr4: 29806772-29814298 Medicago truncatula
Medtr4g077760 5.0kb downstream 5.0kb downstream 5000 false chr4: 29806772-29811771 Medicago truncatula
Medtr4g077760 10.0kb upstream 10.0kb upstream 12527 true chr4: 29811772-29824298 Medicago truncatula
Medtr4g077760 10.0kb upstream 10.0kb upstream 10000 false chr4: 29814299-29824298 Medicago truncatula
Medtr4g077760 10.0kb downstream 10.0kb downstream 12527 true chr4: 29801772-29814298 Medicago truncatula
Medtr4g077760 10.0kb downstream 10.0kb downstream 10000 false chr4: 29801772-29811771 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302637 5265 Fabidae View MSA
124066285 5270 Rosid View MSA
123739622 5271 Pentapetalae View MSA
122786764 5272 Eudicot View MSA
122043818 5273 Angiosperm View MSA
121346051 5274 Embryophyte View MSA
123380313 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.677        
cufflinks 7.427       High
cufflinks 3.073        
cufflinks 2.229        
cufflinks 4.71        
cufflinks 0.16       Low
cufflinks 2.351        
cufflinks 2.468        
cufflinks 2.002        

0 Strain