Gene : Medtr4g109550 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR10202:SF13 - PRESENILIN-2 Description:  presenilin plant-like protein
Genomic Order:  5770 Name:  ? Medtr4g109550
Secondary Identifier:  ? PAC:31115006
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g109550 0.5kb upstream 0.5kb upstream 2314 true chr4: 45527227-45529540 Medicago truncatula
Medtr4g109550 0.5kb upstream 0.5kb upstream 500 false chr4: 45527227-45527726 Medicago truncatula
Medtr4g109550 0.5kb downstream 0.5kb downstream 2314 true chr4: 45527727-45530040 Medicago truncatula
Medtr4g109550 0.5kb downstream 0.5kb downstream 500 false chr4: 45529541-45530040 Medicago truncatula
Medtr4g109550 1.0kb upstream 1.0kb upstream 2814 true chr4: 45526727-45529540 Medicago truncatula
Medtr4g109550 1.0kb upstream 1.0kb upstream 1000 false chr4: 45526727-45527726 Medicago truncatula
Medtr4g109550 1.0kb downstream 1.0kb downstream 2814 true chr4: 45527727-45530540 Medicago truncatula
Medtr4g109550 1.0kb downstream 1.0kb downstream 1000 false chr4: 45529541-45530540 Medicago truncatula
Medtr4g109550 2.0kb upstream 2.0kb upstream 3814 true chr4: 45525727-45529540 Medicago truncatula
Medtr4g109550 2.0kb upstream 2.0kb upstream 2000 false chr4: 45525727-45527726 Medicago truncatula
Medtr4g109550 2.0kb downstream 2.0kb downstream 3814 true chr4: 45527727-45531540 Medicago truncatula
Medtr4g109550 2.0kb downstream 2.0kb downstream 2000 false chr4: 45529541-45531540 Medicago truncatula
Medtr4g109550 5.0kb upstream 5.0kb upstream 6814 true chr4: 45522727-45529540 Medicago truncatula
Medtr4g109550 5.0kb upstream 5.0kb upstream 5000 false chr4: 45522727-45527726 Medicago truncatula
Medtr4g109550 5.0kb downstream 5.0kb downstream 6814 true chr4: 45527727-45534540 Medicago truncatula
Medtr4g109550 5.0kb downstream 5.0kb downstream 5000 false chr4: 45529541-45534540 Medicago truncatula
Medtr4g109550 10.0kb upstream 10.0kb upstream 11814 true chr4: 45517727-45529540 Medicago truncatula
Medtr4g109550 10.0kb upstream 10.0kb upstream 10000 false chr4: 45517727-45527726 Medicago truncatula
Medtr4g109550 10.0kb downstream 10.0kb downstream 11814 true chr4: 45527727-45539540 Medicago truncatula
Medtr4g109550 10.0kb downstream 10.0kb downstream 10000 false chr4: 45529541-45539540 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299279 5265 Fabidae View MSA
124063592 5270 Rosid View MSA
123748546 5271 Pentapetalae View MSA
122790840 5272 Eudicot View MSA
122049657 5273 Angiosperm View MSA
121347498 5274 Embryophyte View MSA
123424512 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.785        
cufflinks 7.821        
cufflinks 10.691     High High
cufflinks 8.287        
cufflinks 10.065       High
cufflinks 4.121       Low
cufflinks 4.194       Low
cufflinks 7.754        
cufflinks 6.847        

0 Strain