Gene : Medtr4g111810 M. truncatula Mt4.0v1
Defline:  (1 of 2) KOG2444 - WD40 repeat protein Description:  transducin/WD-40 repeat protein
Genomic Order:  5863 Name:  ? Medtr4g111810
Secondary Identifier:  ? PAC:31113033
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g111810 0.5kb upstream 0.5kb upstream 8414 true chr4: 46199899-46208312 Medicago truncatula
Medtr4g111810 0.5kb upstream 0.5kb upstream 500 false chr4: 46199899-46200398 Medicago truncatula
Medtr4g111810 0.5kb downstream 0.5kb downstream 8414 true chr4: 46200399-46208812 Medicago truncatula
Medtr4g111810 0.5kb downstream 0.5kb downstream 500 false chr4: 46208313-46208812 Medicago truncatula
Medtr4g111810 1.0kb upstream 1.0kb upstream 8914 true chr4: 46199399-46208312 Medicago truncatula
Medtr4g111810 1.0kb upstream 1.0kb upstream 1000 false chr4: 46199399-46200398 Medicago truncatula
Medtr4g111810 1.0kb downstream 1.0kb downstream 8914 true chr4: 46200399-46209312 Medicago truncatula
Medtr4g111810 1.0kb downstream 1.0kb downstream 1000 false chr4: 46208313-46209312 Medicago truncatula
Medtr4g111810 2.0kb upstream 2.0kb upstream 9914 true chr4: 46198399-46208312 Medicago truncatula
Medtr4g111810 2.0kb upstream 2.0kb upstream 2000 false chr4: 46198399-46200398 Medicago truncatula
Medtr4g111810 2.0kb downstream 2.0kb downstream 9914 true chr4: 46200399-46210312 Medicago truncatula
Medtr4g111810 2.0kb downstream 2.0kb downstream 2000 false chr4: 46208313-46210312 Medicago truncatula
Medtr4g111810 5.0kb upstream 5.0kb upstream 12914 true chr4: 46195399-46208312 Medicago truncatula
Medtr4g111810 5.0kb upstream 5.0kb upstream 5000 false chr4: 46195399-46200398 Medicago truncatula
Medtr4g111810 5.0kb downstream 5.0kb downstream 12914 true chr4: 46200399-46213312 Medicago truncatula
Medtr4g111810 5.0kb downstream 5.0kb downstream 5000 false chr4: 46208313-46213312 Medicago truncatula
Medtr4g111810 10.0kb upstream 10.0kb upstream 17914 true chr4: 46190399-46208312 Medicago truncatula
Medtr4g111810 10.0kb upstream 10.0kb upstream 10000 false chr4: 46190399-46200398 Medicago truncatula
Medtr4g111810 10.0kb downstream 10.0kb downstream 17914 true chr4: 46200399-46218312 Medicago truncatula
Medtr4g111810 10.0kb downstream 10.0kb downstream 10000 false chr4: 46208313-46218312 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026331 5273 Angiosperm View MSA
122303237 5265 Fabidae View MSA
124051139 5270 Rosid View MSA
123748270 5271 Pentapetalae View MSA
122796771 5272 Eudicot View MSA
121345084 5274 Embryophyte View MSA
123424015 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.72        
cufflinks 0.654        
cufflinks 0.81        
cufflinks 0.38       Low
cufflinks 0.779        
cufflinks 0.31       Low
cufflinks 0.665        
cufflinks 0.661        
cufflinks 0.663        

0 Strain