Gene : Medtr4g111710 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR15835:SF2 - NUCLEAR-INTERACTING PARTNER OF ALK Description:  C3HC zinc finger-like protein
Genomic Order:  5855 Name:  ? Medtr4g111710
Secondary Identifier:  ? PAC:31115146
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g111710 0.5kb upstream 0.5kb upstream 5710 true chr4: 46151585-46157294 Medicago truncatula
Medtr4g111710 0.5kb upstream 0.5kb upstream 500 false chr4: 46151585-46152084 Medicago truncatula
Medtr4g111710 0.5kb downstream 0.5kb downstream 5710 true chr4: 46152085-46157794 Medicago truncatula
Medtr4g111710 0.5kb downstream 0.5kb downstream 500 false chr4: 46157295-46157794 Medicago truncatula
Medtr4g111710 1.0kb upstream 1.0kb upstream 6210 true chr4: 46151085-46157294 Medicago truncatula
Medtr4g111710 1.0kb upstream 1.0kb upstream 1000 false chr4: 46151085-46152084 Medicago truncatula
Medtr4g111710 1.0kb downstream 1.0kb downstream 6210 true chr4: 46152085-46158294 Medicago truncatula
Medtr4g111710 1.0kb downstream 1.0kb downstream 1000 false chr4: 46157295-46158294 Medicago truncatula
Medtr4g111710 2.0kb upstream 2.0kb upstream 7210 true chr4: 46150085-46157294 Medicago truncatula
Medtr4g111710 2.0kb upstream 2.0kb upstream 2000 false chr4: 46150085-46152084 Medicago truncatula
Medtr4g111710 2.0kb downstream 2.0kb downstream 7210 true chr4: 46152085-46159294 Medicago truncatula
Medtr4g111710 2.0kb downstream 2.0kb downstream 2000 false chr4: 46157295-46159294 Medicago truncatula
Medtr4g111710 5.0kb upstream 5.0kb upstream 10210 true chr4: 46147085-46157294 Medicago truncatula
Medtr4g111710 5.0kb upstream 5.0kb upstream 5000 false chr4: 46147085-46152084 Medicago truncatula
Medtr4g111710 5.0kb downstream 5.0kb downstream 10210 true chr4: 46152085-46162294 Medicago truncatula
Medtr4g111710 5.0kb downstream 5.0kb downstream 5000 false chr4: 46157295-46162294 Medicago truncatula
Medtr4g111710 10.0kb upstream 10.0kb upstream 15210 true chr4: 46142085-46157294 Medicago truncatula
Medtr4g111710 10.0kb upstream 10.0kb upstream 10000 false chr4: 46142085-46152084 Medicago truncatula
Medtr4g111710 10.0kb downstream 10.0kb downstream 15210 true chr4: 46152085-46167294 Medicago truncatula
Medtr4g111710 10.0kb downstream 10.0kb downstream 10000 false chr4: 46157295-46167294 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305599 5265 Fabidae View MSA
124062210 5270 Rosid View MSA
123740172 5271 Pentapetalae View MSA
122787275 5272 Eudicot View MSA
122048012 5273 Angiosperm View MSA
121349794 5274 Embryophyte View MSA
123428489 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.399        
cufflinks 1.181        
cufflinks 1.265        
cufflinks 0.465       Low
cufflinks 2.233       High
cufflinks 0.472       Low
cufflinks 1.199        
cufflinks 1.09        
cufflinks 1.133        

0 Strain