Gene : Medtr4g109960 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR35502:SF2 - MOVEMENT PROTEIN BINDING PROTEIN 2C Description:  TMV-MP30 binding protein 2C, putative
Genomic Order:  5797 Name:  ? Medtr4g109960
Secondary Identifier:  ? PAC:31113012
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g109960 0.5kb upstream 0.5kb upstream 4459 true chr4: 45748808-45753266 Medicago truncatula
Medtr4g109960 0.5kb upstream 0.5kb upstream 500 false chr4: 45752767-45753266 Medicago truncatula
Medtr4g109960 0.5kb downstream 0.5kb downstream 4459 true chr4: 45748308-45752766 Medicago truncatula
Medtr4g109960 0.5kb downstream 0.5kb downstream 500 false chr4: 45748308-45748807 Medicago truncatula
Medtr4g109960 1.0kb upstream 1.0kb upstream 4959 true chr4: 45748808-45753766 Medicago truncatula
Medtr4g109960 1.0kb upstream 1.0kb upstream 1000 false chr4: 45752767-45753766 Medicago truncatula
Medtr4g109960 1.0kb downstream 1.0kb downstream 4959 true chr4: 45747808-45752766 Medicago truncatula
Medtr4g109960 1.0kb downstream 1.0kb downstream 1000 false chr4: 45747808-45748807 Medicago truncatula
Medtr4g109960 2.0kb upstream 2.0kb upstream 5959 true chr4: 45748808-45754766 Medicago truncatula
Medtr4g109960 2.0kb upstream 2.0kb upstream 2000 false chr4: 45752767-45754766 Medicago truncatula
Medtr4g109960 2.0kb downstream 2.0kb downstream 5959 true chr4: 45746808-45752766 Medicago truncatula
Medtr4g109960 2.0kb downstream 2.0kb downstream 2000 false chr4: 45746808-45748807 Medicago truncatula
Medtr4g109960 5.0kb upstream 5.0kb upstream 8959 true chr4: 45748808-45757766 Medicago truncatula
Medtr4g109960 5.0kb upstream 5.0kb upstream 5000 false chr4: 45752767-45757766 Medicago truncatula
Medtr4g109960 5.0kb downstream 5.0kb downstream 8959 true chr4: 45743808-45752766 Medicago truncatula
Medtr4g109960 5.0kb downstream 5.0kb downstream 5000 false chr4: 45743808-45748807 Medicago truncatula
Medtr4g109960 10.0kb upstream 10.0kb upstream 13959 true chr4: 45748808-45762766 Medicago truncatula
Medtr4g109960 10.0kb upstream 10.0kb upstream 10000 false chr4: 45752767-45762766 Medicago truncatula
Medtr4g109960 10.0kb downstream 10.0kb downstream 13959 true chr4: 45738808-45752766 Medicago truncatula
Medtr4g109960 10.0kb downstream 10.0kb downstream 10000 false chr4: 45738808-45748807 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040997 5273 Angiosperm View MSA
122299272 5265 Fabidae View MSA
124064916 5270 Rosid View MSA
123736835 5271 Pentapetalae View MSA
122796308 5272 Eudicot View MSA
121350543 5274 Embryophyte View MSA
123381783 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.711       High
cufflinks 1.417        
cufflinks 1.224        
cufflinks 0.545       Low
cufflinks 2.172       High
cufflinks 0.55       Low
cufflinks 0.752        
cufflinks 1.104        
cufflinks 0.561       Low

0 Strain