Gene : Medtr4g109980 M. truncatula Mt4.0v1
Defline:  (1 of 42) PF02701 - Dof domain, zinc finger (zf-Dof) Description:  Dof domain zinc finger protein
Genomic Order:  5799 Name:  ? Medtr4g109980
Secondary Identifier:  ? PAC:31114247
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g109980 0.5kb upstream 0.5kb upstream 2024 true chr4: 45762554-45764577 Medicago truncatula
Medtr4g109980 0.5kb upstream 0.5kb upstream 500 false chr4: 45764078-45764577 Medicago truncatula
Medtr4g109980 0.5kb downstream 0.5kb downstream 2024 true chr4: 45762054-45764077 Medicago truncatula
Medtr4g109980 0.5kb downstream 0.5kb downstream 500 false chr4: 45762054-45762553 Medicago truncatula
Medtr4g109980 1.0kb upstream 1.0kb upstream 2524 true chr4: 45762554-45765077 Medicago truncatula
Medtr4g109980 1.0kb upstream 1.0kb upstream 1000 false chr4: 45764078-45765077 Medicago truncatula
Medtr4g109980 1.0kb downstream 1.0kb downstream 2524 true chr4: 45761554-45764077 Medicago truncatula
Medtr4g109980 1.0kb downstream 1.0kb downstream 1000 false chr4: 45761554-45762553 Medicago truncatula
Medtr4g109980 2.0kb upstream 2.0kb upstream 3524 true chr4: 45762554-45766077 Medicago truncatula
Medtr4g109980 2.0kb upstream 2.0kb upstream 2000 false chr4: 45764078-45766077 Medicago truncatula
Medtr4g109980 2.0kb downstream 2.0kb downstream 3524 true chr4: 45760554-45764077 Medicago truncatula
Medtr4g109980 2.0kb downstream 2.0kb downstream 2000 false chr4: 45760554-45762553 Medicago truncatula
Medtr4g109980 5.0kb upstream 5.0kb upstream 6524 true chr4: 45762554-45769077 Medicago truncatula
Medtr4g109980 5.0kb upstream 5.0kb upstream 5000 false chr4: 45764078-45769077 Medicago truncatula
Medtr4g109980 5.0kb downstream 5.0kb downstream 6524 true chr4: 45757554-45764077 Medicago truncatula
Medtr4g109980 5.0kb downstream 5.0kb downstream 5000 false chr4: 45757554-45762553 Medicago truncatula
Medtr4g109980 10.0kb upstream 10.0kb upstream 11524 true chr4: 45762554-45774077 Medicago truncatula
Medtr4g109980 10.0kb upstream 10.0kb upstream 10000 false chr4: 45764078-45774077 Medicago truncatula
Medtr4g109980 10.0kb downstream 10.0kb downstream 11524 true chr4: 45752554-45764077 Medicago truncatula
Medtr4g109980 10.0kb downstream 10.0kb downstream 10000 false chr4: 45752554-45762553 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310656 5265 Fabidae View MSA
124061595 5270 Rosid View MSA
123739205 5271 Pentapetalae View MSA
122790965 5272 Eudicot View MSA
122050733 5273 Angiosperm View MSA
121349903 5274 Embryophyte View MSA
123427226 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.083       Low
cufflinks 10.233     High  
cufflinks 8.514        
cufflinks 1.27        
cufflinks 10.75     High  
cufflinks 0.545        
cufflinks 0.865        
cufflinks 7.983        
cufflinks 1.767        

0 Strain