Gene : Medtr4g110040 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR12565:SF153 - TRANSCRIPTION FACTOR BIM1 Description:  transcription factor BIM2-like protein
Genomic Order:  5804 Name:  ? Medtr4g110040
Secondary Identifier:  ? PAC:31109202
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g110040 0.5kb upstream 0.5kb upstream 9098 true chr4: 45811459-45820556 Medicago truncatula
Medtr4g110040 0.5kb upstream 0.5kb upstream 500 false chr4: 45820057-45820556 Medicago truncatula
Medtr4g110040 0.5kb downstream 0.5kb downstream 9098 true chr4: 45810959-45820056 Medicago truncatula
Medtr4g110040 0.5kb downstream 0.5kb downstream 500 false chr4: 45810959-45811458 Medicago truncatula
Medtr4g110040 1.0kb upstream 1.0kb upstream 9598 true chr4: 45811459-45821056 Medicago truncatula
Medtr4g110040 1.0kb upstream 1.0kb upstream 1000 false chr4: 45820057-45821056 Medicago truncatula
Medtr4g110040 1.0kb downstream 1.0kb downstream 9598 true chr4: 45810459-45820056 Medicago truncatula
Medtr4g110040 1.0kb downstream 1.0kb downstream 1000 false chr4: 45810459-45811458 Medicago truncatula
Medtr4g110040 2.0kb upstream 2.0kb upstream 10598 true chr4: 45811459-45822056 Medicago truncatula
Medtr4g110040 2.0kb upstream 2.0kb upstream 2000 false chr4: 45820057-45822056 Medicago truncatula
Medtr4g110040 2.0kb downstream 2.0kb downstream 10598 true chr4: 45809459-45820056 Medicago truncatula
Medtr4g110040 2.0kb downstream 2.0kb downstream 2000 false chr4: 45809459-45811458 Medicago truncatula
Medtr4g110040 5.0kb upstream 5.0kb upstream 13598 true chr4: 45811459-45825056 Medicago truncatula
Medtr4g110040 5.0kb upstream 5.0kb upstream 5000 false chr4: 45820057-45825056 Medicago truncatula
Medtr4g110040 5.0kb downstream 5.0kb downstream 13598 true chr4: 45806459-45820056 Medicago truncatula
Medtr4g110040 5.0kb downstream 5.0kb downstream 5000 false chr4: 45806459-45811458 Medicago truncatula
Medtr4g110040 10.0kb upstream 10.0kb upstream 18598 true chr4: 45811459-45830056 Medicago truncatula
Medtr4g110040 10.0kb upstream 10.0kb upstream 10000 false chr4: 45820057-45830056 Medicago truncatula
Medtr4g110040 10.0kb downstream 10.0kb downstream 18598 true chr4: 45801459-45820056 Medicago truncatula
Medtr4g110040 10.0kb downstream 10.0kb downstream 10000 false chr4: 45801459-45811458 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302462 5265 Fabidae View MSA
124066777 5270 Rosid View MSA
123738645 5271 Pentapetalae View MSA
122790983 5272 Eudicot View MSA
122046881 5273 Angiosperm View MSA
121348142 5274 Embryophyte View MSA
123428440 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.392       Low
cufflinks 0.655        
cufflinks 0.489        
cufflinks 0.454        
cufflinks 0.653        
cufflinks 0.523        
cufflinks 1.035       High
cufflinks 0.411        
cufflinks 1.33       High

0 Strain