Gene : Medtr4g109680 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR23244:SF285 - LEUCINE-ZIPPER-LIKE TRANSCRIPTIONAL REGULATOR 1 Description:  acyl-CoA-binding domain protein
Genomic Order:  5781 Name:  ? Medtr4g109680
Secondary Identifier:  ? PAC:31107648
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g109680 0.5kb upstream 0.5kb upstream 6936 true chr4: 45596881-45603816 Medicago truncatula
Medtr4g109680 0.5kb upstream 0.5kb upstream 500 false chr4: 45603317-45603816 Medicago truncatula
Medtr4g109680 0.5kb downstream 0.5kb downstream 6936 true chr4: 45596381-45603316 Medicago truncatula
Medtr4g109680 0.5kb downstream 0.5kb downstream 500 false chr4: 45596381-45596880 Medicago truncatula
Medtr4g109680 1.0kb upstream 1.0kb upstream 7436 true chr4: 45596881-45604316 Medicago truncatula
Medtr4g109680 1.0kb upstream 1.0kb upstream 1000 false chr4: 45603317-45604316 Medicago truncatula
Medtr4g109680 1.0kb downstream 1.0kb downstream 7436 true chr4: 45595881-45603316 Medicago truncatula
Medtr4g109680 1.0kb downstream 1.0kb downstream 1000 false chr4: 45595881-45596880 Medicago truncatula
Medtr4g109680 2.0kb upstream 2.0kb upstream 8436 true chr4: 45596881-45605316 Medicago truncatula
Medtr4g109680 2.0kb upstream 2.0kb upstream 2000 false chr4: 45603317-45605316 Medicago truncatula
Medtr4g109680 2.0kb downstream 2.0kb downstream 8436 true chr4: 45594881-45603316 Medicago truncatula
Medtr4g109680 2.0kb downstream 2.0kb downstream 2000 false chr4: 45594881-45596880 Medicago truncatula
Medtr4g109680 5.0kb upstream 5.0kb upstream 11436 true chr4: 45596881-45608316 Medicago truncatula
Medtr4g109680 5.0kb upstream 5.0kb upstream 5000 false chr4: 45603317-45608316 Medicago truncatula
Medtr4g109680 5.0kb downstream 5.0kb downstream 11436 true chr4: 45591881-45603316 Medicago truncatula
Medtr4g109680 5.0kb downstream 5.0kb downstream 5000 false chr4: 45591881-45596880 Medicago truncatula
Medtr4g109680 10.0kb upstream 10.0kb upstream 16436 true chr4: 45596881-45613316 Medicago truncatula
Medtr4g109680 10.0kb upstream 10.0kb upstream 10000 false chr4: 45603317-45613316 Medicago truncatula
Medtr4g109680 10.0kb downstream 10.0kb downstream 16436 true chr4: 45586881-45603316 Medicago truncatula
Medtr4g109680 10.0kb downstream 10.0kb downstream 10000 false chr4: 45586881-45596880 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307789 5265 Fabidae View MSA
124062622 5270 Rosid View MSA
123743479 5271 Pentapetalae View MSA
122792460 5272 Eudicot View MSA
122048338 5273 Angiosperm View MSA
121348105 5274 Embryophyte View MSA
123428379 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.523        
cufflinks 2.093        
cufflinks 1.904        
cufflinks 0.282       Low
cufflinks 2.89       High
cufflinks 0.293       Low
cufflinks 0.424        
cufflinks 2.032        
cufflinks 0.607        

0 Strain