Gene : Medtr4g112560 M. truncatula Mt4.0v1
Defline:  (1 of 32) PF01107 - Viral movement protein (MP) (MP) Description:  viral movement protein
Genomic Order:  5833 Name:  ? Medtr4g112560
Secondary Identifier:  ? PAC:31108270
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g112560 0.5kb upstream 0.5kb upstream 989 true chr4: 46000891-46001879 Medicago truncatula
Medtr4g112560 0.5kb upstream 0.5kb upstream 500 false chr4: 46001380-46001879 Medicago truncatula
Medtr4g112560 0.5kb downstream 0.5kb downstream 989 true chr4: 46000391-46001379 Medicago truncatula
Medtr4g112560 0.5kb downstream 0.5kb downstream 500 false chr4: 46000391-46000890 Medicago truncatula
Medtr4g112560 1.0kb upstream 1.0kb upstream 1489 true chr4: 46000891-46002379 Medicago truncatula
Medtr4g112560 1.0kb upstream 1.0kb upstream 1000 false chr4: 46001380-46002379 Medicago truncatula
Medtr4g112560 1.0kb downstream 1.0kb downstream 1489 true chr4: 45999891-46001379 Medicago truncatula
Medtr4g112560 1.0kb downstream 1.0kb downstream 1000 false chr4: 45999891-46000890 Medicago truncatula
Medtr4g112560 2.0kb upstream 2.0kb upstream 2489 true chr4: 46000891-46003379 Medicago truncatula
Medtr4g112560 2.0kb upstream 2.0kb upstream 2000 false chr4: 46001380-46003379 Medicago truncatula
Medtr4g112560 2.0kb downstream 2.0kb downstream 2489 true chr4: 45998891-46001379 Medicago truncatula
Medtr4g112560 2.0kb downstream 2.0kb downstream 2000 false chr4: 45998891-46000890 Medicago truncatula
Medtr4g112560 5.0kb upstream 5.0kb upstream 5489 true chr4: 46000891-46006379 Medicago truncatula
Medtr4g112560 5.0kb upstream 5.0kb upstream 5000 false chr4: 46001380-46006379 Medicago truncatula
Medtr4g112560 5.0kb downstream 5.0kb downstream 5489 true chr4: 45995891-46001379 Medicago truncatula
Medtr4g112560 5.0kb downstream 5.0kb downstream 5000 false chr4: 45995891-46000890 Medicago truncatula
Medtr4g112560 10.0kb upstream 10.0kb upstream 10489 true chr4: 46000891-46011379 Medicago truncatula
Medtr4g112560 10.0kb upstream 10.0kb upstream 10000 false chr4: 46001380-46011379 Medicago truncatula
Medtr4g112560 10.0kb downstream 10.0kb downstream 10489 true chr4: 45990891-46001379 Medicago truncatula
Medtr4g112560 10.0kb downstream 10.0kb downstream 10000 false chr4: 45990891-46000890 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028362 5273 Angiosperm View MSA
122288761 5265 Fabidae View MSA
124028953 5270 Rosid View MSA
123751157 5271 Pentapetalae View MSA
122773930 5272 Eudicot View MSA
121297863 5274 Embryophyte View MSA
123335877 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain