Gene : Medtr4g112550 M. truncatula Mt4.0v1
Defline:  (1 of 32) PF01107 - Viral movement protein (MP) (MP) Description:  viral movement protein
Genomic Order:  5834 Name:  ? Medtr4g112550
Secondary Identifier:  ? PAC:31110122
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g112550 0.5kb upstream 0.5kb upstream 1283 true chr4: 46001463-46002745 Medicago truncatula
Medtr4g112550 0.5kb upstream 0.5kb upstream 500 false chr4: 46001463-46001962 Medicago truncatula
Medtr4g112550 0.5kb downstream 0.5kb downstream 1283 true chr4: 46001963-46003245 Medicago truncatula
Medtr4g112550 0.5kb downstream 0.5kb downstream 500 false chr4: 46002746-46003245 Medicago truncatula
Medtr4g112550 1.0kb upstream 1.0kb upstream 1783 true chr4: 46000963-46002745 Medicago truncatula
Medtr4g112550 1.0kb upstream 1.0kb upstream 1000 false chr4: 46000963-46001962 Medicago truncatula
Medtr4g112550 1.0kb downstream 1.0kb downstream 1783 true chr4: 46001963-46003745 Medicago truncatula
Medtr4g112550 1.0kb downstream 1.0kb downstream 1000 false chr4: 46002746-46003745 Medicago truncatula
Medtr4g112550 2.0kb upstream 2.0kb upstream 2783 true chr4: 45999963-46002745 Medicago truncatula
Medtr4g112550 2.0kb upstream 2.0kb upstream 2000 false chr4: 45999963-46001962 Medicago truncatula
Medtr4g112550 2.0kb downstream 2.0kb downstream 2783 true chr4: 46001963-46004745 Medicago truncatula
Medtr4g112550 2.0kb downstream 2.0kb downstream 2000 false chr4: 46002746-46004745 Medicago truncatula
Medtr4g112550 5.0kb upstream 5.0kb upstream 5783 true chr4: 45996963-46002745 Medicago truncatula
Medtr4g112550 5.0kb upstream 5.0kb upstream 5000 false chr4: 45996963-46001962 Medicago truncatula
Medtr4g112550 5.0kb downstream 5.0kb downstream 5783 true chr4: 46001963-46007745 Medicago truncatula
Medtr4g112550 5.0kb downstream 5.0kb downstream 5000 false chr4: 46002746-46007745 Medicago truncatula
Medtr4g112550 10.0kb upstream 10.0kb upstream 10783 true chr4: 45991963-46002745 Medicago truncatula
Medtr4g112550 10.0kb upstream 10.0kb upstream 10000 false chr4: 45991963-46001962 Medicago truncatula
Medtr4g112550 10.0kb downstream 10.0kb downstream 10783 true chr4: 46001963-46012745 Medicago truncatula
Medtr4g112550 10.0kb downstream 10.0kb downstream 10000 false chr4: 46002746-46012745 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028362 5273 Angiosperm View MSA
122288761 5265 Fabidae View MSA
124028953 5270 Rosid View MSA
123751157 5271 Pentapetalae View MSA
122773930 5272 Eudicot View MSA
121297863 5274 Embryophyte View MSA
123335877 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain