Gene : Medtr4g112530 M. truncatula Mt4.0v1
Defline:  (1 of 18) PF00581 - Rhodanese-like domain Description:  extracellular calcium sensing receptor
Genomic Order:  5836 Name:  ? Medtr4g112530
Secondary Identifier:  ? PAC:31114189
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g112530 0.5kb upstream 0.5kb upstream 9682 true chr4: 46011218-46020899 Medicago truncatula
Medtr4g112530 0.5kb upstream 0.5kb upstream 500 false chr4: 46020400-46020899 Medicago truncatula
Medtr4g112530 0.5kb downstream 0.5kb downstream 9682 true chr4: 46010718-46020399 Medicago truncatula
Medtr4g112530 0.5kb downstream 0.5kb downstream 500 false chr4: 46010718-46011217 Medicago truncatula
Medtr4g112530 1.0kb upstream 1.0kb upstream 10182 true chr4: 46011218-46021399 Medicago truncatula
Medtr4g112530 1.0kb upstream 1.0kb upstream 1000 false chr4: 46020400-46021399 Medicago truncatula
Medtr4g112530 1.0kb downstream 1.0kb downstream 10182 true chr4: 46010218-46020399 Medicago truncatula
Medtr4g112530 1.0kb downstream 1.0kb downstream 1000 false chr4: 46010218-46011217 Medicago truncatula
Medtr4g112530 2.0kb upstream 2.0kb upstream 11182 true chr4: 46011218-46022399 Medicago truncatula
Medtr4g112530 2.0kb upstream 2.0kb upstream 2000 false chr4: 46020400-46022399 Medicago truncatula
Medtr4g112530 2.0kb downstream 2.0kb downstream 11182 true chr4: 46009218-46020399 Medicago truncatula
Medtr4g112530 2.0kb downstream 2.0kb downstream 2000 false chr4: 46009218-46011217 Medicago truncatula
Medtr4g112530 5.0kb upstream 5.0kb upstream 14182 true chr4: 46011218-46025399 Medicago truncatula
Medtr4g112530 5.0kb upstream 5.0kb upstream 5000 false chr4: 46020400-46025399 Medicago truncatula
Medtr4g112530 5.0kb downstream 5.0kb downstream 14182 true chr4: 46006218-46020399 Medicago truncatula
Medtr4g112530 5.0kb downstream 5.0kb downstream 5000 false chr4: 46006218-46011217 Medicago truncatula
Medtr4g112530 10.0kb upstream 10.0kb upstream 19182 true chr4: 46011218-46030399 Medicago truncatula
Medtr4g112530 10.0kb upstream 10.0kb upstream 10000 false chr4: 46020400-46030399 Medicago truncatula
Medtr4g112530 10.0kb downstream 10.0kb downstream 19182 true chr4: 46001218-46020399 Medicago truncatula
Medtr4g112530 10.0kb downstream 10.0kb downstream 10000 false chr4: 46001218-46011217 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041508 5273 Angiosperm View MSA
122304765 5265 Fabidae View MSA
124067334 5270 Rosid View MSA
123738970 5271 Pentapetalae View MSA
122793267 5272 Eudicot View MSA
121347966 5274 Embryophyte View MSA
123427649 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.005     Low Low
cufflinks 11.701     High High
cufflinks 2.21        
cufflinks 0.02     Low  
cufflinks 5.611        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.015     Low  
cufflinks 5.62        
cufflinks 0.117        

0 Strain