Gene : Medtr4g112780 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR23105//PTHR23105:SF61 - RIBOSOMAL PROTEIN L7AE FAMILY MEMBER Description:  ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein
Genomic Order:  5820 Name:  ? Medtr4g112780
Secondary Identifier:  ? PAC:31112117
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g112780 0.5kb upstream 0.5kb upstream 3022 true chr4: 45933331-45936352 Medicago truncatula
Medtr4g112780 0.5kb upstream 0.5kb upstream 500 false chr4: 45935853-45936352 Medicago truncatula
Medtr4g112780 0.5kb downstream 0.5kb downstream 3022 true chr4: 45932831-45935852 Medicago truncatula
Medtr4g112780 0.5kb downstream 0.5kb downstream 500 false chr4: 45932831-45933330 Medicago truncatula
Medtr4g112780 1.0kb upstream 1.0kb upstream 3522 true chr4: 45933331-45936852 Medicago truncatula
Medtr4g112780 1.0kb upstream 1.0kb upstream 1000 false chr4: 45935853-45936852 Medicago truncatula
Medtr4g112780 1.0kb downstream 1.0kb downstream 3522 true chr4: 45932331-45935852 Medicago truncatula
Medtr4g112780 1.0kb downstream 1.0kb downstream 1000 false chr4: 45932331-45933330 Medicago truncatula
Medtr4g112780 2.0kb upstream 2.0kb upstream 4522 true chr4: 45933331-45937852 Medicago truncatula
Medtr4g112780 2.0kb upstream 2.0kb upstream 2000 false chr4: 45935853-45937852 Medicago truncatula
Medtr4g112780 2.0kb downstream 2.0kb downstream 4522 true chr4: 45931331-45935852 Medicago truncatula
Medtr4g112780 2.0kb downstream 2.0kb downstream 2000 false chr4: 45931331-45933330 Medicago truncatula
Medtr4g112780 5.0kb upstream 5.0kb upstream 7522 true chr4: 45933331-45940852 Medicago truncatula
Medtr4g112780 5.0kb upstream 5.0kb upstream 5000 false chr4: 45935853-45940852 Medicago truncatula
Medtr4g112780 5.0kb downstream 5.0kb downstream 7522 true chr4: 45928331-45935852 Medicago truncatula
Medtr4g112780 5.0kb downstream 5.0kb downstream 5000 false chr4: 45928331-45933330 Medicago truncatula
Medtr4g112780 10.0kb upstream 10.0kb upstream 12522 true chr4: 45933331-45945852 Medicago truncatula
Medtr4g112780 10.0kb upstream 10.0kb upstream 10000 false chr4: 45935853-45945852 Medicago truncatula
Medtr4g112780 10.0kb downstream 10.0kb downstream 12522 true chr4: 45923331-45935852 Medicago truncatula
Medtr4g112780 10.0kb downstream 10.0kb downstream 10000 false chr4: 45923331-45933330 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040888 5273 Angiosperm View MSA
122303873 5265 Fabidae View MSA
124066793 5270 Rosid View MSA
123737256 5271 Pentapetalae View MSA
122793138 5272 Eudicot View MSA
121345742 5274 Embryophyte View MSA
123425979 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.666        
cufflinks 8.77        
cufflinks 10.427     High  
cufflinks 8.614        
cufflinks 23.087     High High
cufflinks 5.377       Low
cufflinks 12.876     High  
cufflinks 11.636     High  
cufflinks 10.589     High  

0 Strain